RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 Q6ZSR9 355 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 NRSN1Q8IZ57 195 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 PLA2G15Q8NCC3 412 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 SLC6A17Q9H1V8 727 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 TRPV4Q9HBA0 871 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 SPAG4Q9NPE6 437 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 TCF20Q9UGU0 1960 aaKnown RBP9.69□□□□□ -0.86
VTA1-205ENST00000620996 ARHGEF33A8MVX0 844 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 QSOX1O00391 747 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 SGTAO43765 313 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 FKBP6O75344 327 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 KRT6AP02538 564 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 KRT6BP04259 564 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 MPC1LP0DKB6 136 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 GNAZP19086 355 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 KRT6CP48668 564 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 ATP4BP51164 291 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 FAM124AQ86V42 546 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 RETREG3Q86VR2 466 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 SYTL1Q8IYJ3 562 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 C2orf73Q8N5S3 287 aaPredicted RBP9.69□□□□□ -0.86
VTA1-205ENST00000620996 DNAJB14Q8TBM8 379 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 HCAR2Q8TDS4 363 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 RDH14Q9HBH5 336 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 DNAJC11Q9NVH1 559 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 AIG1Q9NVV5 245 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 CLEC1BQ9P126 229 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 GMPR2Q9P2T1 348 aaKnown RBP9.69□□□□□ -0.86
VTA1-205ENST00000620996 PCDHGA7Q9Y5G6 932 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 NUP210Q8TEM1 1887 aaPredicted RBP9.68□□□□□ -0.86
VTA1-205ENST00000620996 EYSQ5T1H1 3165 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 PSMD11O00231 422 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 SCAMP1O15126 338 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 GSTT1P30711 240 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 MAT2AP31153 395 aaKnown RBP9.68□□□□□ -0.86
VTA1-205ENST00000620996 POLR2JP52435 117 aaKnown RBP9.68□□□□□ -0.86
VTA1-205ENST00000620996 IRF8Q02556 426 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 LRP8Q14114 963 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 CST6Q15828 149 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 ZNF423Q2M1K9 1284 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 AAK1Q2M2I8 961 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 RFTN2Q52LD8 501 aaPredicted RBP9.68□□□□□ -0.86
VTA1-205ENST00000620996 XKR7Q5GH72 579 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 XKR6Q5GH73 641 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 PIGGQ5H8A4 983 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.68□□□□□ -0.86
VTA1-205ENST00000620996 RNF175Q8N4F7 328 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 NRG4Q8WWG1 115 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 JADE3Q92613 823 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 OSBPL6Q9BZF3 934 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 SDR39U1Q9NRG7 319 aaPredicted RBP9.68□□□□□ -0.86
VTA1-205ENST00000620996 NMRK1Q9NWW6 199 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 ATXN10Q9UBB4 475 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 PSMD13Q9UNM6 376 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 EIF3LQ9Y262 564 aaKnown RBP9.68□□□□□ -0.86
VTA1-205ENST00000620996 GPR45Q9Y5Y3 372 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 H3BQ06 376 aaPredicted RBP9.68□□□□□ -0.86
VTA1-205ENST00000620996 MANBAO00462 879 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 TRIM38O00635 465 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 AREL1O15033 823 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 DNAJA2O60884 412 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 ENO2P09104 434 aaPredicted RBP9.68□□□□□ -0.86
VTA1-205ENST00000620996 EBLN1P0CF75 366 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 GGT5P36269 586 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 PRLHRP49683 370 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 MS4A2Q01362 244 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 CHIT1Q13231 466 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 NFE2L1Q14494 772 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 PTGR1Q14914 329 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 TRIP10Q15642 601 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 C6orf10Q5SRN2 563 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 SDE2Q6IQ49 451 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 HEATR4Q86WZ0 1026 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 TCAIMQ8N3R3 496 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 DNAJC9Q8WXX5 260 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 ELSPBP1Q96BH3 223 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 VPS35Q96QK1 796 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 ZBTB18Q99592 522 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 EPS15L1Q9UBC2 864 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 SERGEFQ9UGK8 458 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 HCN2Q9UL51 889 aa9.68□□□□□ -0.86
VTA1-205ENST00000620996 TDRKHQ9Y2W6 561 aaKnown RBP9.68□□□□□ -0.86
VTA1-205ENST00000620996 H0Y858 1186 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 POP7O75817 140 aaKnown RBP9.67□□□□□ -0.86
VTA1-205ENST00000620996 ZNF8P17098 575 aaPredicted RBP9.67□□□□□ -0.86
VTA1-205ENST00000620996 ACADVLP49748 655 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 DGKQP52824 942 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 DYNC1I2Q13409 638 aaKnown RBP9.67□□□□□ -0.86
VTA1-205ENST00000620996 GRAMD1BQ3KR37 738 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.67□□□□□ -0.86
VTA1-205ENST00000620996 NEK5Q6P3R8 708 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 CYP20A1Q6UW02 462 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 LRRC70Q7Z2Q7 622 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 ADGRG6Q86SQ4 1221 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 RGL4Q8IZJ4 473 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 OR14C36Q8NHC7 312 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 PPP3R2Q96LZ3 170 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 LRGUKQ96M69 825 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 LRTM1Q9HBL6 345 aa9.67□□□□□ -0.86
VTA1-205ENST00000620996 GID8Q9NWU2 228 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms