RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 CTSCP53634 463 aa15.71■□□□□ 0.11
CD40-207ENST00000620709 SH3BP2P78314 561 aa15.71■□□□□ 0.11
CD40-207ENST00000620709 THOC5Q13769 683 aaKnown RBP15.71■□□□□ 0.11
CD40-207ENST00000620709 TAF1AQ15573 450 aaPredicted RBP15.71■□□□□ 0.11
CD40-207ENST00000620709 GPRC6AQ5T6X5 926 aa15.71■□□□□ 0.11
CD40-207ENST00000620709 AGAP9Q5VTM2 703 aa15.71■□□□□ 0.11
CD40-207ENST00000620709 CACHD1Q5VU97 1274 aa15.71■□□□□ 0.11
CD40-207ENST00000620709 TIPARPQ7Z3E1 657 aaKnown RBP15.71■□□□□ 0.11
CD40-207ENST00000620709 C11orf96Q7Z7L8 435 aa15.71■□□□□ 0.11
CD40-207ENST00000620709 RASGRP3Q8IV61 690 aa15.71■□□□□ 0.11
CD40-207ENST00000620709 CNTN4Q8IWV2 1026 aa15.71■□□□□ 0.11
CD40-207ENST00000620709 STYXQ8WUJ0 223 aa15.71■□□□□ 0.11
CD40-207ENST00000620709 OR6C1Q96RD1 312 aa15.71■□□□□ 0.11
CD40-207ENST00000620709 SMC6Q96SB8 1091 aa15.71■□□□□ 0.11
CD40-207ENST00000620709 ULBP3Q9BZM4 244 aa15.71■□□□□ 0.11
CD40-207ENST00000620709 SLC40A1Q9NP59 571 aa15.71■□□□□ 0.11
CD40-207ENST00000620709 IARS2Q9NSE4 1012 aaKnown RBP15.71■□□□□ 0.11
CD40-207ENST00000620709 SLC17A6Q9P2U8 582 aa15.71■□□□□ 0.11
CD40-207ENST00000620709 ARL5AQ9Y689 179 aa15.71■□□□□ 0.11
CD40-207ENST00000620709 VAPBO95292 243 aa15.7■□□□□ 0.1
CD40-207ENST00000620709 C9P02748 559 aa15.7■□□□□ 0.1
CD40-207ENST00000620709 MT-ND3P03897 115 aa15.7■□□□□ 0.1
CD40-207ENST00000620709 ARNTP27540 789 aa15.7■□□□□ 0.1
CD40-207ENST00000620709 CSE1LP55060 971 aaKnown RBP15.7■□□□□ 0.1
CD40-207ENST00000620709 ACVR1Q04771 509 aa15.7■□□□□ 0.1
CD40-207ENST00000620709 ITGA9Q13797 1035 aa15.7■□□□□ 0.1
CD40-207ENST00000620709 PLCL1Q15111 1095 aa15.7■□□□□ 0.1
CD40-207ENST00000620709 GRTP1Q5TC63 336 aa15.7■□□□□ 0.1
CD40-207ENST00000620709 C16orf46Q6P387 395 aa15.7■□□□□ 0.1
CD40-207ENST00000620709 BEND7Q8N7W2 519 aaPredicted RBP15.7■□□□□ 0.1
CD40-207ENST00000620709 OR13J1Q8NGT2 312 aa15.7■□□□□ 0.1
CD40-207ENST00000620709 ZNF398Q8TD17 642 aa15.7■□□□□ 0.1
CD40-207ENST00000620709 CALML6Q8TD86 181 aa15.7■□□□□ 0.1
CD40-207ENST00000620709 NAT14Q8WUY8 206 aa15.7■□□□□ 0.1
CD40-207ENST00000620709 C2orf81A6NN90 581 aa15.69■□□□□ 0.1
CD40-207ENST00000620709 FOXO6A8MYZ6 492 aa15.69■□□□□ 0.1
CD40-207ENST00000620709 TRIM49D1C9J1S8 452 aa15.69■□□□□ 0.1
CD40-207ENST00000620709 PRAMEF1O95521 474 aa15.69■□□□□ 0.1
CD40-207ENST00000620709 ANKRD34CP0C6C1 535 aa15.69■□□□□ 0.1
CD40-207ENST00000620709 CCR10P46092 362 aa15.69■□□□□ 0.1
CD40-207ENST00000620709 CAPZBP47756 277 aa15.69■□□□□ 0.1
CD40-207ENST00000620709 PRAMEP78395 509 aa15.69■□□□□ 0.1
CD40-207ENST00000620709 TMPRSS15P98073 1019 aa15.69■□□□□ 0.1
CD40-207ENST00000620709 PDE1BQ01064 536 aa15.69■□□□□ 0.1
CD40-207ENST00000620709 NFE2L1Q14494 772 aa15.69■□□□□ 0.1
CD40-207ENST00000620709 TUBB8Q3ZCM7 444 aa15.69■□□□□ 0.1
CD40-207ENST00000620709 WASH2PQ6VEQ5 465 aa15.69■□□□□ 0.1
CD40-207ENST00000620709 FAM83HQ6ZRV2 1179 aaPredicted RBP15.69■□□□□ 0.1
CD40-207ENST00000620709 STRA8Q7Z7C7 330 aa15.69■□□□□ 0.1
CD40-207ENST00000620709 RBM12BQ8IXT5 1001 aaKnown RBP15.69■□□□□ 0.1
CD40-207ENST00000620709 GPR150Q8NGU9 434 aa15.69■□□□□ 0.1
CD40-207ENST00000620709 ALKBH8Q96BT7 664 aaKnown RBP15.69■□□□□ 0.1
CD40-207ENST00000620709 ZDHHC12Q96GR4 267 aa15.69■□□□□ 0.1
CD40-207ENST00000620709 RBBP8Q99708 897 aa15.69■□□□□ 0.1
CD40-207ENST00000620709 TRIT1Q9H3H1 467 aaKnown RBP15.69■□□□□ 0.1
CD40-207ENST00000620709 SSU72Q9NP77 194 aaKnown RBP15.69■□□□□ 0.1
CD40-207ENST00000620709 WASH6PQ9NQA3 447 aa15.69■□□□□ 0.1
CD40-207ENST00000620709 STARD5Q9NSY2 213 aa15.69■□□□□ 0.1
CD40-207ENST00000620709 IMP3Q9NV31 184 aaKnown RBP15.69■□□□□ 0.1
CD40-207ENST00000620709 SIDT1Q9NXL6 827 aaKnown RBP15.69■□□□□ 0.1
CD40-207ENST00000620709 IL17BQ9UHF5 180 aa15.69■□□□□ 0.1
CD40-207ENST00000620709 PSAT1Q9Y617 370 aa15.69■□□□□ 0.1
CD40-207ENST00000620709 CFAP20Q9Y6A4 193 aaKnown RBP15.69■□□□□ 0.1
CD40-207ENST00000620709 ZNF106Q9H2Y7 1883 aaKnown RBP15.69■□□□□ 0.1
CD40-207ENST00000620709 A0A1W2PPM1 405 aa15.68■□□□□ 0.1
CD40-207ENST00000620709 PRR19A6NJB7 356 aa15.68■□□□□ 0.1
CD40-207ENST00000620709 CREB1P16220 341 aa15.68■□□□□ 0.1
CD40-207ENST00000620709 ZNF28P17035 718 aa15.68■□□□□ 0.1
CD40-207ENST00000620709 ITGB6P18564 788 aa15.68■□□□□ 0.1
CD40-207ENST00000620709 LPOP22079 712 aaPredicted RBP15.68■□□□□ 0.1
CD40-207ENST00000620709 SPRP35270 261 aaPredicted RBP15.68■□□□□ 0.1
CD40-207ENST00000620709 ZNF140P52738 457 aaPredicted RBP15.68■□□□□ 0.1
CD40-207ENST00000620709 POLE2P56282 527 aa15.68■□□□□ 0.1
CD40-207ENST00000620709 ABHD18Q0P651 414 aa15.68■□□□□ 0.1
CD40-207ENST00000620709 BMPR2Q13873 1038 aa15.68■□□□□ 0.1
CD40-207ENST00000620709 RPE65Q16518 533 aa15.68■□□□□ 0.1
CD40-207ENST00000620709 NEPROQ6NW34 567 aa15.68■□□□□ 0.1
CD40-207ENST00000620709 PTRH1Q86Y79 214 aaKnown RBP15.68■□□□□ 0.1
CD40-207ENST00000620709 LMNTD2Q8IXW0 634 aa15.68■□□□□ 0.1
CD40-207ENST00000620709 ESX1Q8N693 406 aa15.68■□□□□ 0.1
CD40-207ENST00000620709 GALNT6Q8NCL4 622 aa15.68■□□□□ 0.1
CD40-207ENST00000620709 DDHD1Q8NEL9 900 aa15.68■□□□□ 0.1
CD40-207ENST00000620709 OR4K2Q8NGD2 314 aa15.68■□□□□ 0.1
CD40-207ENST00000620709 SLC45A3Q96JT2 553 aa15.68■□□□□ 0.1
CD40-207ENST00000620709 DNAJC1Q96KC8 554 aaKnown RBP15.68■□□□□ 0.1
CD40-207ENST00000620709 EFHD1Q9BUP0 239 aa15.68■□□□□ 0.1
CD40-207ENST00000620709 SPRY4Q9C004 299 aa15.68■□□□□ 0.1
CD40-207ENST00000620709 ZNF768Q9H5H4 540 aaKnown RBP15.68■□□□□ 0.1
CD40-207ENST00000620709 ASB8Q9H765 288 aa15.68■□□□□ 0.1
CD40-207ENST00000620709 KCNK9Q9NPC2 374 aa15.68■□□□□ 0.1
CD40-207ENST00000620709 NLE1Q9NVX2 485 aaPredicted RBP15.68■□□□□ 0.1
CD40-207ENST00000620709 GEMIN8Q9NWZ8 242 aaKnown RBP15.68■□□□□ 0.1
CD40-207ENST00000620709 FKBPLQ9UIM3 349 aa15.68■□□□□ 0.1
CD40-207ENST00000620709 LNPEPQ9UIQ6 1025 aa15.68■□□□□ 0.1
CD40-207ENST00000620709 TMEM184BQ9Y519 407 aaPredicted RBP15.68■□□□□ 0.1
CD40-207ENST00000620709 KCTD3Q9Y597 815 aa15.68■□□□□ 0.1
CD40-207ENST00000620709 MRPS18BQ9Y676 258 aaKnown RBP15.68■□□□□ 0.1
CD40-207ENST00000620709 FLNBO75369 2602 aaKnown RBP15.68■□□□□ 0.1
CD40-207ENST00000620709 TMEM120BA0PK00 339 aa15.68■□□□□ 0.1
CD40-207ENST00000620709 GOLGA8TH3BQL2 631 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms