RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 CHN2P52757 468 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 SYTL3Q4VX76 610 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 FNDC3BQ53EP0 1204 aaKnown RBP12.1□□□□□ -0.47
CIITA-212ENST00000618207 PRAMEF9Q5VWM5 478 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 TICAM1Q8IUC6 712 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 RAVER1Q8IY67 606 aaKnown RBP12.1□□□□□ -0.47
CIITA-212ENST00000618207 PHACTR4Q8IZ21 702 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 ASB11Q8WXH4 323 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 ZNF707Q96C28 371 aaPredicted RBP12.1□□□□□ -0.47
CIITA-212ENST00000618207 MTERF1Q99551 399 aaKnown RBP12.1□□□□□ -0.47
CIITA-212ENST00000618207 IGFLR1Q9H665 355 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 RPF2Q9H7B2 306 aaKnown RBP12.1□□□□□ -0.47
CIITA-212ENST00000618207 ZNF106Q9H2Y7 1883 aaKnown RBP12.1□□□□□ -0.47
CIITA-212ENST00000618207 SPTBN5Q9NRC6 3674 aaKnown RBP12.1□□□□□ -0.47
CIITA-212ENST00000618207 KNL1Q8NG31 2342 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 RNF103-CHMP3A0A140T963 221 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 EBLN1P0CF75 366 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 HSD17B1P14061 328 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 IL10P22301 178 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 NAA20P61599 178 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 INPP5AQ14642 412 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 MAPKAPK3Q16644 382 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 ZNF805Q5CZA5 627 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 ADNP2Q6IQ32 1131 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 UGT2A3Q6UWM9 527 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 ST13P4Q8IZP2 240 aaPredicted RBP12.1□□□□□ -0.47
CIITA-212ENST00000618207 OR10A6Q8NH74 314 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 MCOLN3Q8TDD5 553 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 APOLD1Q96LR9 279 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 RNF145Q96MT1 663 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 BTBD9Q96Q07 612 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 HEBP1Q9NRV9 189 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 ACTR3BQ9P1U1 418 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 PRKAB1Q9Y478 270 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 ANKRD28O15084 1053 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 SGTAO43765 313 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 PRKCQQ04759 706 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 CHIT1Q13231 466 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 PGS1Q32NB8 556 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 TMEM220Q6QAJ8 160 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 DLEU7Q6UYE1 221 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 LIPIQ6XZB0 460 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 HID1Q8IV36 788 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 CBR4Q8N4T8 237 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 RASGEF1AQ8N9B8 481 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 CATSPER1Q8NEC5 780 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 OR10Q1Q8NGQ4 319 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 FAM81AQ8TBF8 368 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 FIG4Q92562 907 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 TMEM159Q96B96 161 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 ZBTB18Q99592 522 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 CGREF1Q99674 301 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 CENPKQ9BS16 269 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 Q9H521 79 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 IKZF5Q9H5V7 419 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 IGLV3-16A0A075B6K0 115 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 SEC24DO94855 1032 aaPredicted RBP12.09□□□□□ -0.47
CIITA-212ENST00000618207 CLIC3O95833 236 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 KRT6AP02538 564 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 KRT6BP04259 564 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 BCKDHAP12694 445 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 CYP2A7P20853 494 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 WASP42768 502 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 KRT6CP48668 564 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 POLE2P56282 527 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 TMEM115Q12893 351 aaPredicted RBP12.09□□□□□ -0.47
CIITA-212ENST00000618207 PPP1R8Q12972 351 aaKnown RBP12.09□□□□□ -0.47
CIITA-212ENST00000618207 NAE1Q13564 534 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 CACHD1Q5VU97 1274 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 GLYATQ6IB77 296 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 ASZ1Q8WWH4 475 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 SLC13A3Q8WWT9 602 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 APIPQ96GX9 242 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 OR52E6Q96RD3 313 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 NTMT1Q9BV86 223 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 SLC12A9Q9BXP2 914 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 RDH14Q9HBH5 336 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 SLC6A13Q9NSD5 602 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 IFRD1O00458 451 aaPredicted RBP12.09□□□□□ -0.47
CIITA-212ENST00000618207 PLOD2O00469 737 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 MMP20O60882 483 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 OR6B1O95007 311 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 PGRP06401 933 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 ETS2P15036 469 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 ZNF30P17039 623 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 MAP4P27816 1152 aaKnown RBP12.09□□□□□ -0.47
CIITA-212ENST00000618207 NRIP1P48552 1158 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 HENMT1Q5T8I9 393 aaKnown RBP12.09□□□□□ -0.47
CIITA-212ENST00000618207 SATL1Q86VE3 508 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 ADGRG5Q8IZF4 528 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 C2orf73Q8N5S3 287 aaPredicted RBP12.09□□□□□ -0.47
CIITA-212ENST00000618207 VPS50Q96JG6 964 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 CCT7Q99832 543 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 TRIM15Q9C019 465 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 SOX17Q9H6I2 414 aaPredicted RBP12.09□□□□□ -0.47
CIITA-212ENST00000618207 CCM2LQ9NUG4 571 aaPredicted RBP12.09□□□□□ -0.47
CIITA-212ENST00000618207 C1orf109Q9NX04 203 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 PDP2Q9P2J9 529 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 OAZ3Q9UMX2 235 aa12.09□□□□□ -0.47
CIITA-212ENST00000618207 LZTS1Q9Y250 596 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms