RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 FUNDC2Q9BWH2 189 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 PRSS21Q9Y6M0 314 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.14■□□□□ 0.17
CNOT3-208ENST00000613073 NPIPB15A6NHN6 443 aaPredicted RBP16.14■□□□□ 0.17
CNOT3-208ENST00000613073 NR5A2O00482 541 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 SNX2O60749 519 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 SEC14L2O76054 403 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 TRIM16O95361 564 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 FGBP02675 491 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 BPIP17213 487 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 TGM1P22735 817 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 SHMT2P34897 504 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 KIF19Q2TAC6 998 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 C18orf21Q32NC0 220 aaPredicted RBP16.14■□□□□ 0.17
CNOT3-208ENST00000613073 FUT11Q495W5 492 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 XAF1Q6GPH4 301 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 TBPL2Q6SJ96 375 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 USP43Q70EL4 1123 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 RETREG3Q86VR2 466 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 ZCCHC7Q8N3Z6 543 aaKnown RBP16.14■□□□□ 0.17
CNOT3-208ENST00000613073 LKAAEAR1Q8TD35 194 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 EFHD2Q96C19 240 aaPredicted RBP16.14■□□□□ 0.17
CNOT3-208ENST00000613073 TUBGCP3Q96CW5 907 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 CLPBQ9H078 707 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 LINC00597Q9H2U6 94 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 PIF1Q9H611 641 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 WBP1LQ9NX94 342 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 ANKMY1Q9P2S6 941 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 EIF2B4Q9UI10 523 aaKnown RBP16.14■□□□□ 0.17
CNOT3-208ENST00000613073 SLCO3A1Q9UIG8 710 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 COMMD10Q9Y6G5 202 aa16.14■□□□□ 0.17
CNOT3-208ENST00000613073 CPNE6O95741 557 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 SERPINA4P29622 427 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 CTNNB1P35222 781 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 ARL1P40616 181 aaPredicted RBP16.13■□□□□ 0.17
CNOT3-208ENST00000613073 PSMD8P48556 350 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 CCT8P50990 548 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 NTHL1P78549 312 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 HTRA4P83105 476 aaPredicted RBP16.13■□□□□ 0.17
CNOT3-208ENST00000613073 NFATC2Q13469 925 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 INPP5AQ14642 412 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 RBBP7Q16576 425 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 ATAD3BQ5T9A4 648 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 ZNF697Q5TEC3 545 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 PACRGLQ8N7B6 248 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.13■□□□□ 0.17
CNOT3-208ENST00000613073 NRBF2Q96F24 287 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 CENPNQ96H22 339 aaPredicted RBP16.13■□□□□ 0.17
CNOT3-208ENST00000613073 CDK15Q96Q40 435 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 EMILIN2Q9BXX0 1053 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 INSL6Q9Y581 213 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 CARNS1A5YM72 827 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 RASAL1O95294 804 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 FGF4P08620 206 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 CHRNA6Q15825 494 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 BROXQ5VW32 411 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 KANK2Q63ZY3 851 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 STK40Q8N2I9 435 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 CLP1Q92989 425 aaKnown RBP16.13■□□□□ 0.17
CNOT3-208ENST00000613073 ASB2Q96Q27 587 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 ZDHHC6Q9H6R6 413 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 MAGED1Q9Y5V3 778 aaPredicted RBP16.13■□□□□ 0.17
CNOT3-208ENST00000613073 HCFC2Q9Y5Z7 792 aa16.13■□□□□ 0.17
CNOT3-208ENST00000613073 GLYATL1P3A0A0U1RQE8 302 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 NOTOA8MTQ0 251 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 ZNF7P17097 686 aaPredicted RBP16.12■□□□□ 0.17
CNOT3-208ENST00000613073 CDKN3Q16667 212 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 RFLNAQ6ZTI6 216 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 SFRP1Q8N474 314 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 POF1BQ8WVV4 589 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 BADQ92934 168 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 DUS3LQ96G46 650 aaKnown RBP16.12■□□□□ 0.17
CNOT3-208ENST00000613073 ACOX2Q99424 681 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 BBS2Q9BXC9 721 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 MIR1-1HGQ9H1L0 117 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 TRPV5Q9NQA5 729 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 CRLS1Q9UJA2 301 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 ZNF225Q9UK10 706 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 PCTPQ9UKL6 214 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 GUCA1CO95843 209 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 ALBP02768 609 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 RPS17P08708 135 aaKnown RBP16.12■□□□□ 0.17
CNOT3-208ENST00000613073 SNRPD1P62314 119 aaKnown RBP16.12■□□□□ 0.17
CNOT3-208ENST00000613073 MAPRE2Q15555 327 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 FAM209AQ5JX71 171 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 TMEM236Q5W0B7 351 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 R3HCC1LQ7Z5L2 792 aaKnown RBP16.12■□□□□ 0.17
CNOT3-208ENST00000613073 SYVN1Q86TM6 617 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 GPR65Q8IYL9 337 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 SIX5Q8N196 739 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 MRPL43Q8N983 215 aaKnown RBP16.12■□□□□ 0.17
CNOT3-208ENST00000613073 CCDC90BQ9GZT6 254 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 PARVBQ9HBI1 364 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 IFT52Q9Y366 437 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 DHRS7Q9Y394 339 aa16.12■□□□□ 0.17
CNOT3-208ENST00000613073 DYTNA2CJ06 578 aa16.11■□□□□ 0.17
CNOT3-208ENST00000613073 SOCS5O75159 536 aa16.11■□□□□ 0.17
CNOT3-208ENST00000613073 SLC25A14O95258 325 aaPredicted RBP16.11■□□□□ 0.17
CNOT3-208ENST00000613073 UGT2B4P06133 528 aa16.11■□□□□ 0.17
CNOT3-208ENST00000613073 HGFP14210 728 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms