RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 C8orf59Q8N0T1 100 aaPredicted RBP16.82■□□□□ 0.28
NEK3-206ENST00000611833 SELENOMQ8WWX9 145 aa16.82■□□□□ 0.28
NEK3-206ENST00000611833 AURKBQ96GD4 344 aaPredicted RBP16.82■□□□□ 0.28
NEK3-206ENST00000611833 COG8Q96MW5 612 aa16.82■□□□□ 0.28
NEK3-206ENST00000611833 ACPTQ9BZG2 426 aa16.82■□□□□ 0.28
NEK3-206ENST00000611833 PREBQ9HCU5 417 aa16.82■□□□□ 0.28
NEK3-206ENST00000611833 NOL3O60936 208 aaKnown RBP16.82■□□□□ 0.28
NEK3-206ENST00000611833 GALK1P51570 392 aa16.82■□□□□ 0.28
NEK3-206ENST00000611833 MPPE1Q53F39 396 aa16.82■□□□□ 0.28
NEK3-206ENST00000611833 TTC23Q5W5X9 447 aa16.82■□□□□ 0.28
NEK3-206ENST00000611833 ZNF773Q6PK81 442 aa16.82■□□□□ 0.28
NEK3-206ENST00000611833 HTR3DQ70Z44 454 aa16.82■□□□□ 0.28
NEK3-206ENST00000611833 UBE2R2Q712K3 238 aaPredicted RBP16.82■□□□□ 0.28
NEK3-206ENST00000611833 METTL3Q86U44 580 aaKnown RBP16.82■□□□□ 0.28
NEK3-206ENST00000611833 HS6ST3Q8IZP7 471 aa16.82■□□□□ 0.28
NEK3-206ENST00000611833 CPXM2Q8N436 756 aa16.82■□□□□ 0.28
NEK3-206ENST00000611833 ZNF555Q8NEP9 628 aa16.82■□□□□ 0.28
NEK3-206ENST00000611833 ZNF689Q96CS4 500 aaPredicted RBP16.82■□□□□ 0.28
NEK3-206ENST00000611833 THAP11Q96EK4 314 aa16.82■□□□□ 0.28
NEK3-206ENST00000611833 LYSMD1Q96S90 227 aa16.82■□□□□ 0.28
NEK3-206ENST00000611833 ELOVL6Q9H5J4 265 aa16.82■□□□□ 0.28
NEK3-206ENST00000611833 UTS2RQ9UKP6 389 aa16.82■□□□□ 0.28
NEK3-206ENST00000611833 PDE10AQ9Y233 779 aa16.82■□□□□ 0.28
NEK3-206ENST00000611833 PCDHB14Q9Y5E9 798 aa16.82■□□□□ 0.28
NEK3-206ENST00000611833 MKI67P46013 3256 aaKnown RBP16.82■□□□□ 0.28
NEK3-206ENST00000611833 PABPN1LA6NDY0 278 aaKnown RBP16.81■□□□□ 0.28
NEK3-206ENST00000611833 NOBOXO60393 691 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 PARNO95453 639 aaKnown RBP16.81■□□□□ 0.28
NEK3-206ENST00000611833 CCR7P32248 378 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 S100A3P33764 101 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 PTPN5P54829 565 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 SNRPD1P62314 119 aaKnown RBP16.81■□□□□ 0.28
NEK3-206ENST00000611833 BROXQ5VW32 411 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 ATG9BQ674R7 924 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 TPRG1Q6ZUI0 275 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 ANKRD33Q7Z3H0 272 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 SVOPLQ8N434 492 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 FIBINQ8TAL6 211 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 FAM120BQ96EK7 910 aaKnown RBP16.81■□□□□ 0.28
NEK3-206ENST00000611833 RDH12Q96NR8 316 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 TUBA1CQ9BQE3 449 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 KAT8Q9H7Z6 458 aaKnown RBP16.81■□□□□ 0.28
NEK3-206ENST00000611833 ERN1O75460 977 aaKnown RBP16.81■□□□□ 0.28
NEK3-206ENST00000611833 CREG1O75629 220 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 HIST1H2AGP0C0S8 130 aaPredicted RBP16.81■□□□□ 0.28
NEK3-206ENST00000611833 SRCP12931 536 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 HIST1H2ADP20671 130 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 POLR2IP36954 125 aaKnown RBP16.81■□□□□ 0.28
NEK3-206ENST00000611833 NEK2P51955 445 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 HSPA14Q0VDF9 509 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 EPS8Q12929 822 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 PON2Q15165 354 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 ATP13A5Q4VNC0 1218 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 MPP7Q5T2T1 576 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 CNKSR3Q6P9H4 555 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 SPESP1Q6UW49 350 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 RFLNAQ6ZTI6 216 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 USP45Q70EL2 814 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 FKBP9P1Q75LS8 142 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 DDX53Q86TM3 631 aaKnown RBP16.81■□□□□ 0.28
NEK3-206ENST00000611833 ADHFE1Q8IWW8 467 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 HS3ST5Q8IZT8 346 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 DRAXINQ8NBI3 349 aaPredicted RBP16.81■□□□□ 0.28
NEK3-206ENST00000611833 DNAJB8Q8NHS0 232 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 ZNF296Q8WUU4 475 aaPredicted RBP16.81■□□□□ 0.28
NEK3-206ENST00000611833 SCRN2Q96FV2 425 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 HIST1H2AHQ96KK5 128 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 DOK1Q99704 481 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 HIST1H2AJQ99878 128 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 H2AFJQ9BTM1 129 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 OSBPL10Q9BXB5 764 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 PAIP1Q9H074 479 aaKnown RBP16.81■□□□□ 0.28
NEK3-206ENST00000611833 RMND5AQ9H871 391 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 FANCEQ9HB96 536 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 HPS4Q9NQG7 708 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 SLC6A13Q9NSD5 602 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 FAM118AQ9NWS6 357 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 GALNT8Q9NY28 637 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 CIDEBQ9UHD4 219 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 CDH7Q9ULB5 785 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 SNX6Q9UNH7 406 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 DLGAP4Q9Y2H0 992 aa16.81■□□□□ 0.28
NEK3-206ENST00000611833 A0A0J9YVX5 310 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 AREL1O15033 823 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 E2F6O75461 281 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 ARHGEF15O94989 841 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 OR56A5P0C7T3 313 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 GJA1P17302 382 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 EPORP19235 508 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 CLDN8P56748 225 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 B4GALNT1Q00973 533 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 PGS1Q32NB8 556 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 TMEM132CQ8N3T6 1108 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 MRPS31Q92665 395 aaKnown RBP16.8■□□□□ 0.28
NEK3-206ENST00000611833 TSSK3Q96PN8 268 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 RBM4BQ9BQ04 359 aaKnown RBP16.8■□□□□ 0.28
NEK3-206ENST00000611833 RBM4Q9BWF3 364 aaKnown RBP16.8■□□□□ 0.28
NEK3-206ENST00000611833 NAA50Q9GZZ1 169 aaKnown RBP16.8■□□□□ 0.28
NEK3-206ENST00000611833 KCNH6Q9H252 994 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 PLGRKTQ9HBL7 147 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms