RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 NUDT21O43809 227 aaKnown RBP13.94□□□□□ -0.18
UPF1-211ENST00000600868 KLK8O60259 260 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 SUPT3HO75486 399 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 ANXA5P08758 320 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 TPBGLP0DKB5 382 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 ERGP11308 486 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 CD59P13987 128 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 GLB1P16278 677 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 HSD17B2P37059 387 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 ETV4P43268 484 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 HNMTP50135 292 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 GPR18Q14330 331 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 ARHGAP19Q14CB8 494 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 NR0B2Q15466 257 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 TCAIMQ8N3R3 496 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 RAB42Q8N4Z0 105 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 OR52E1Q8NGJ3 308 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 DENND1AQ8TEH3 1009 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 ATL1Q8WXF7 558 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 FBXL8Q96CD0 374 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 FAM111AQ96PZ2 611 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 MENTQ9BUN1 341 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 RAB11FIP5Q9BXF6 653 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.94□□□□□ -0.18
UPF1-211ENST00000600868 C12orf65Q9H3J6 166 aaKnown RBP13.94□□□□□ -0.18
UPF1-211ENST00000600868 UTP6Q9NYH9 597 aaKnown RBP13.94□□□□□ -0.18
UPF1-211ENST00000600868 CD274Q9NZQ7 290 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 SPATA7Q9P0W8 599 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 LNPEPQ9UIQ6 1025 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 PADI4Q9UM07 663 aa13.94□□□□□ -0.18
UPF1-211ENST00000600868 WDR87Q6ZQQ6 2873 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 LY6G6EA0A0G2JKS1 128 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 LILRA5A6NI73 299 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 C4orf47A7E2U8 309 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 G3V2L1 256 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 H3BQF6 201 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 SMIM24O75264 130 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 GUCA1CO95843 209 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 SLC16A8O95907 504 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 S100BP04271 92 aaPredicted RBP13.93□□□□□ -0.18
UPF1-211ENST00000600868 PNLIPP16233 465 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 TAC1P20366 129 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 ATP5F1P24539 256 aaPredicted RBP13.93□□□□□ -0.18
UPF1-211ENST00000600868 HPDP32754 393 aaPredicted RBP13.93□□□□□ -0.18
UPF1-211ENST00000600868 RAB28P51157 221 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 ALDH18A1P54886 795 aaKnown RBP13.93□□□□□ -0.18
UPF1-211ENST00000600868 PPP2R2AP63151 447 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 BIRC2Q13490 618 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 NR1D2Q14995 579 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 CYP2A13Q16696 494 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 PROX2Q3B8N5 592 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 SULT1C3Q6IMI6 304 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 ZYG11AQ6WRX3 759 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 ZNF438Q7Z4V0 828 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 ARMC2Q8NEN0 867 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 HMGCLL1Q8TB92 370 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 EXT2Q93063 718 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 RHBDF1Q96CC6 855 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 EGFL8Q99944 293 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 SELENOSQ9BQE4 189 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 EVA1BQ9NVM1 165 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 STOX2Q9P2F5 926 aaPredicted RBP13.93□□□□□ -0.18
UPF1-211ENST00000600868 COPG2Q9UBF2 871 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 PTBP2Q9UKA9 531 aaKnown RBP13.93□□□□□ -0.18
UPF1-211ENST00000600868 ICKQ9UPZ9 632 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 BTBD3Q9Y2F9 522 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 RNF215Q9Y6U7 377 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 U3KQA8 63 aa13.93□□□□□ -0.18
UPF1-211ENST00000600868 COL5A1P20908 1838 aaPredicted RBP13.92□□□□□ -0.18
UPF1-211ENST00000600868 EME2A4GXA9 379 aaPredicted RBP13.92□□□□□ -0.18
UPF1-211ENST00000600868 FAM221BA6H8Z2 402 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 KRT87PA6NCN2 255 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 NCF1BA6NI72 391 aaPredicted RBP13.92□□□□□ -0.18
UPF1-211ENST00000600868 ZNF839A8K0R7 811 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 RHPN2P1A8MT19 583 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 NCF1CA8MVU1 366 aaPredicted RBP13.92□□□□□ -0.18
UPF1-211ENST00000600868 STX16-NPEPL1H3BU86 382 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 STX16O14662 325 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 DLX3O60479 287 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 DHRS4L1P0CG22 281 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 MYL2P10916 166 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 CKMT1AP12532 417 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 GFAPP14136 432 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 NCF1P14598 390 aaPredicted RBP13.92□□□□□ -0.18
UPF1-211ENST00000600868 CPA3P15088 417 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 IMPA1P29218 277 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 PKLRP30613 574 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 SHMT2P34897 504 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 GGT5P36269 586 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 GPR3P46089 330 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 DUSP3P51452 185 aaPredicted RBP13.92□□□□□ -0.18
UPF1-211ENST00000600868 NFKB2Q00653 900 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 PFKFB4Q16877 469 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 STPG1Q5TH74 334 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 ANKS6Q68DC2 871 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 AGTRAPQ6RW13 159 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 MBOAT1Q6ZNC8 495 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 SLC22A9Q8IVM8 553 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 FBXO39Q8N4B4 442 aa13.92□□□□□ -0.18
UPF1-211ENST00000600868 CCDC63Q8NA47 563 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms