RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 NELFEP18615 380 aaKnown RBP24.96■■□□□ 1.59
TRIM28-204ENST00000594806 PRDX3P30048 256 aaKnown RBP24.96■■□□□ 1.59
TRIM28-204ENST00000594806 HSD17B2P37059 387 aa24.96■■□□□ 1.59
TRIM28-204ENST00000594806 ABCG1P45844 678 aa24.96■■□□□ 1.59
TRIM28-204ENST00000594806 KPNA2P52292 529 aaKnown RBP24.96■■□□□ 1.59
TRIM28-204ENST00000594806 IL2P60568 153 aa24.96■■□□□ 1.59
TRIM28-204ENST00000594806 KIR2DS3Q14952 304 aa24.96■■□□□ 1.59
TRIM28-204ENST00000594806 KBTBD12Q3ZCT8 623 aa24.96■■□□□ 1.59
TRIM28-204ENST00000594806 GRTP1Q5TC63 336 aa24.96■■□□□ 1.59
TRIM28-204ENST00000594806 PAQR3Q6TCH7 311 aa24.96■■□□□ 1.59
TRIM28-204ENST00000594806 OR2L8Q8NGY9 312 aa24.96■■□□□ 1.59
TRIM28-204ENST00000594806 SLC22A18Q96BI1 424 aa24.96■■□□□ 1.59
TRIM28-204ENST00000594806 ELMO2Q96JJ3 720 aa24.96■■□□□ 1.59
TRIM28-204ENST00000594806 SLC41A2Q96JW4 573 aa24.96■■□□□ 1.59
TRIM28-204ENST00000594806 MAP3K3Q99759 626 aa24.96■■□□□ 1.59
TRIM28-204ENST00000594806 FUT8Q9BYC5 575 aa24.96■■□□□ 1.59
TRIM28-204ENST00000594806 FBXO8Q9NRD0 319 aa24.96■■□□□ 1.59
TRIM28-204ENST00000594806 ACTR10Q9NZ32 417 aa24.96■■□□□ 1.59
TRIM28-204ENST00000594806 NINJ2Q9NZG7 142 aa24.96■■□□□ 1.59
TRIM28-204ENST00000594806 PCDHGA3Q9Y5H0 932 aa24.96■■□□□ 1.59
TRIM28-204ENST00000594806 EFCAB7A8K855 629 aa24.95■■□□□ 1.58
TRIM28-204ENST00000594806 GFYI3L273 518 aa24.95■■□□□ 1.58
TRIM28-204ENST00000594806 KIF1CO43896 1103 aaKnown RBP24.95■■□□□ 1.58
TRIM28-204ENST00000594806 ZBTB11O95625 1053 aaPredicted RBP24.95■■□□□ 1.58
TRIM28-204ENST00000594806 CHRM5P08912 532 aaPredicted RBP24.95■■□□□ 1.58
TRIM28-204ENST00000594806 HGFP14210 728 aa24.95■■□□□ 1.58
TRIM28-204ENST00000594806 ITIH1P19827 911 aa24.95■■□□□ 1.58
TRIM28-204ENST00000594806 SPRP35270 261 aaPredicted RBP24.95■■□□□ 1.58
TRIM28-204ENST00000594806 PPP1CAP62136 330 aa24.95■■□□□ 1.58
TRIM28-204ENST00000594806 MC2RQ01718 297 aa24.95■■□□□ 1.58
TRIM28-204ENST00000594806 POU4F1Q01851 419 aa24.95■■□□□ 1.58
TRIM28-204ENST00000594806 RASGRP3Q8IV61 690 aa24.95■■□□□ 1.58
TRIM28-204ENST00000594806 BMPERQ8N8U9 685 aa24.95■■□□□ 1.58
TRIM28-204ENST00000594806 OR9A1PQ8NGU1 263 aa24.95■■□□□ 1.58
TRIM28-204ENST00000594806 SNIP1Q8TAD8 396 aaKnown RBP24.95■■□□□ 1.58
TRIM28-204ENST00000594806 HMGCLL1Q8TB92 370 aa24.95■■□□□ 1.58
TRIM28-204ENST00000594806 TEFMQ96QE5 360 aaKnown RBP24.95■■□□□ 1.58
TRIM28-204ENST00000594806 CYTH2Q99418 400 aa24.95■■□□□ 1.58
TRIM28-204ENST00000594806 RBBP8Q99708 897 aa24.95■■□□□ 1.58
TRIM28-204ENST00000594806 ZPBPQ9BS86 351 aa24.95■■□□□ 1.58
TRIM28-204ENST00000594806 DDA1Q9BW61 102 aa24.95■■□□□ 1.58
TRIM28-204ENST00000594806 ASPSCR1Q9BZE9 553 aa24.95■■□□□ 1.58
TRIM28-204ENST00000594806 POPDC3Q9HBV1 291 aa24.95■■□□□ 1.58
TRIM28-204ENST00000594806 SYTL2Q9HCH5 934 aa24.95■■□□□ 1.58
TRIM28-204ENST00000594806 NFU1Q9UMS0 254 aa24.95■■□□□ 1.58
TRIM28-204ENST00000594806 SLC16A5O15375 505 aa24.94■■□□□ 1.58
TRIM28-204ENST00000594806 FKBP9O95302 570 aa24.94■■□□□ 1.58
TRIM28-204ENST00000594806 C8GP07360 202 aa24.94■■□□□ 1.58
TRIM28-204ENST00000594806 CCL4P13236 92 aa24.94■■□□□ 1.58
TRIM28-204ENST00000594806 CDH3P22223 829 aa24.94■■□□□ 1.58
TRIM28-204ENST00000594806 CD82P27701 267 aa24.94■■□□□ 1.58
TRIM28-204ENST00000594806 MAP4P27816 1152 aaKnown RBP24.94■■□□□ 1.58
TRIM28-204ENST00000594806 BDKRB1P46663 353 aa24.94■■□□□ 1.58
TRIM28-204ENST00000594806 MAPK10P53779 464 aa24.94■■□□□ 1.58
TRIM28-204ENST00000594806 HSD11B2P80365 405 aa24.94■■□□□ 1.58
TRIM28-204ENST00000594806 SP140Q13342 867 aa24.94■■□□□ 1.58
TRIM28-204ENST00000594806 ARHGAP19Q14CB8 494 aa24.94■■□□□ 1.58
TRIM28-204ENST00000594806 ANKS6Q68DC2 871 aa24.94■■□□□ 1.58
TRIM28-204ENST00000594806 PROSER1Q86XN7 944 aa24.94■■□□□ 1.58
TRIM28-204ENST00000594806 FAM129CQ86XR2 697 aa24.94■■□□□ 1.58
TRIM28-204ENST00000594806 MYO1HQ8N1T3 1032 aa24.94■■□□□ 1.58
TRIM28-204ENST00000594806 PPM1NQ8N819 430 aa24.94■■□□□ 1.58
TRIM28-204ENST00000594806 EEF1AKMT1Q8WVE0 214 aa24.94■■□□□ 1.58
TRIM28-204ENST00000594806 TSPAN17Q96FV3 270 aa24.94■■□□□ 1.58
TRIM28-204ENST00000594806 PDLIM5Q96HC4 596 aaKnown RBP24.94■■□□□ 1.58
TRIM28-204ENST00000594806 PITPNM3Q9BZ71 974 aa24.94■■□□□ 1.58
TRIM28-204ENST00000594806 CDC42EP4Q9H3Q1 356 aaKnown RBP24.94■■□□□ 1.58
TRIM28-204ENST00000594806 OCIAD1Q9NX40 245 aa24.94■■□□□ 1.58
TRIM28-204ENST00000594806 SLC39A1Q9NY26 324 aa24.94■■□□□ 1.58
TRIM28-204ENST00000594806 ACSL6Q9UKU0 697 aa24.94■■□□□ 1.58
TRIM28-204ENST00000594806 PLAGL1Q9UM63 463 aa24.94■■□□□ 1.58
TRIM28-204ENST00000594806 RUVBL2Q9Y230 463 aaKnown RBP24.94■■□□□ 1.58
TRIM28-204ENST00000594806 PCDHB11Q9Y5F2 797 aa24.94■■□□□ 1.58
TRIM28-204ENST00000594806 IGHV5-51A0A0C4DH38 117 aa24.93■■□□□ 1.58
TRIM28-204ENST00000594806 PMS2P1A4D2B8 440 aa24.93■■□□□ 1.58
TRIM28-204ENST00000594806 ZNF839A8K0R7 811 aa24.93■■□□□ 1.58
TRIM28-204ENST00000594806 ARHGEF33A8MVX0 844 aa24.93■■□□□ 1.58
TRIM28-204ENST00000594806 MYO1CO00159 1063 aa24.93■■□□□ 1.58
TRIM28-204ENST00000594806 MAP3K7O43318 606 aa24.93■■□□□ 1.58
TRIM28-204ENST00000594806 ETV5P41161 510 aa24.93■■□□□ 1.58
TRIM28-204ENST00000594806 ARL4DP49703 201 aa24.93■■□□□ 1.58
TRIM28-204ENST00000594806 SEPHS1P49903 392 aa24.93■■□□□ 1.58
TRIM28-204ENST00000594806 SLC12A2P55011 1212 aa24.93■■□□□ 1.58
TRIM28-204ENST00000594806 TEX35Q5T0J7 233 aa24.93■■□□□ 1.58
TRIM28-204ENST00000594806 DCAF12Q5T6F0 453 aa24.93■■□□□ 1.58
TRIM28-204ENST00000594806 SPESP1Q6UW49 350 aa24.93■■□□□ 1.58
TRIM28-204ENST00000594806 BPHLQ86WA6 291 aaPredicted RBP24.93■■□□□ 1.58
TRIM28-204ENST00000594806 NKAPQ8N5F7 415 aaKnown RBP24.93■■□□□ 1.58
TRIM28-204ENST00000594806 LRRN4CLQ8ND94 238 aa24.93■■□□□ 1.58
TRIM28-204ENST00000594806 ANKRD7Q92527 254 aa24.93■■□□□ 1.58
TRIM28-204ENST00000594806 USP7Q93009 1102 aa24.93■■□□□ 1.58
TRIM28-204ENST00000594806 GPR22Q99680 433 aa24.93■■□□□ 1.58
TRIM28-204ENST00000594806 OLFM1Q99784 485 aa24.93■■□□□ 1.58
TRIM28-204ENST00000594806 SIDT1Q9NXL6 827 aaKnown RBP24.93■■□□□ 1.58
TRIM28-204ENST00000594806 TSR3Q9UJK0 312 aaKnown RBP24.93■■□□□ 1.58
TRIM28-204ENST00000594806 BTRCQ9Y297 605 aa24.93■■□□□ 1.58
TRIM28-204ENST00000594806 APC2O95996 2303 aa24.93■■□□□ 1.58
TRIM28-204ENST00000594806 PCM1Q15154 2024 aa24.93■■□□□ 1.58
TRIM28-204ENST00000594806 PCBP4P57723 403 aaKnown RBP24.92■■□□□ 1.58
TRIM28-204ENST00000594806 IL11RAQ14626 422 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms