RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 CEACAM20Q6UY09 585 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 GPR155Q7Z3F1 870 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 LRRC6Q86X45 466 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 VRK3Q8IV63 474 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 PPIL6Q8IXY8 311 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 SLC22A15Q8IZD6 547 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 CARFQ8N187 725 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 PHC3Q8NDX5 983 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 OR52E1Q8NGJ3 308 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 OR5AR1Q8NGP9 310 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 UBXN4Q92575 508 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 LPGAT1Q92604 370 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 NKD1Q969G9 470 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 CAPZA3Q96KX2 299 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 SIGLEC10Q96LC7 697 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 BIRC8Q96P09 236 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 FERD3LQ96RJ6 166 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 CCNL2Q96S94 520 aaPredicted RBP10.88□□□□□ -0.67
SMAD4-211ENST00000590499 MAP3K3Q99759 626 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 CTRCQ99895 268 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 HGH1Q9BTY7 390 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 ANAPC5Q9UJX4 755 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 PILRAQ9UKJ1 303 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 POMT2Q9UKY4 750 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 TMEM184BQ9Y519 407 aaPredicted RBP10.88□□□□□ -0.67
SMAD4-211ENST00000590499 TEX51A0A1B0GUA7 166 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 MAGEB16A2A368 324 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 CTAGE9A4FU28 777 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 GOLGA8KD6RF30 607 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 GOLGA8TH3BQL2 631 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 BTN3A3O00478 584 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 BTN3A1O00481 513 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 DNALI1O14645 258 aaPredicted RBP10.87□□□□□ -0.67
SMAD4-211ENST00000590499 SLCO2B1O94956 709 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 DLGAP3O95886 979 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 FGF5P12034 268 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 ITGB6P18564 788 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 WT1P19544 449 aaPredicted RBP10.87□□□□□ -0.67
SMAD4-211ENST00000590499 OGNP20774 298 aaKnown RBP10.87□□□□□ -0.67
SMAD4-211ENST00000590499 ADARP55265 1226 aaKnown RBP10.87□□□□□ -0.67
SMAD4-211ENST00000590499 KRT33BQ14525 404 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 BRD3Q15059 726 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 SYTL3Q4VX76 610 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 DNTTIP2Q5QJE6 756 aaKnown RBP10.87□□□□□ -0.67
SMAD4-211ENST00000590499 MRNIPQ6NTE8 343 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 CENPUQ71F23 418 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 VASH2Q86V25 355 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 KMT5CQ86Y97 462 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 CILP2Q8IUL8 1156 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 TBC1D21Q8IYX1 336 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 KRT222Q8N1A0 295 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 D2HGDHQ8N465 521 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 OR4E2Q8NGC2 313 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 OR5K2Q8NHB8 316 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 LCN9Q8WX39 176 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 ZNF669Q96BR6 464 aaPredicted RBP10.87□□□□□ -0.67
SMAD4-211ENST00000590499 PPM1MQ96MI6 270 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 BBC3Q96PG8 261 aaPredicted RBP10.87□□□□□ -0.67
SMAD4-211ENST00000590499 TCF12Q99081 682 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 PITPNM3Q9BZ71 974 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 SRMSQ9H3Y6 488 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 IL1RAPL1Q9NZN1 696 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 GNPTGQ9UJJ9 305 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 ICKQ9UPZ9 632 aa10.87□□□□□ -0.67
SMAD4-211ENST00000590499 TLN1Q9Y490 2541 aaKnown RBP10.87□□□□□ -0.67
SMAD4-211ENST00000590499 COL6A6A6NMZ7 2263 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 MATN2O00339 956 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 POLR1CO15160 346 aaPredicted RBP10.86□□□□□ -0.67
SMAD4-211ENST00000590499 RAD1O60671 282 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 NDUFS3O75489 264 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 STK17BO94768 372 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 USP1O94782 785 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 FOLR1P15328 257 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 POLR2CP19387 275 aaPredicted RBP10.86□□□□□ -0.67
SMAD4-211ENST00000590499 GATA4P43694 442 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 EIF3BP55884 814 aaKnown RBP10.86□□□□□ -0.67
SMAD4-211ENST00000590499 PRKG2Q13237 762 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 DHX34Q14147 1143 aaKnown RBP10.86□□□□□ -0.67
SMAD4-211ENST00000590499 GBX1Q14549 363 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 IL11RAQ14626 422 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 SOWAHCQ53LP3 525 aaPredicted RBP10.86□□□□□ -0.67
SMAD4-211ENST00000590499 DNAJC21Q5F1R6 531 aaKnown RBP10.86□□□□□ -0.67
SMAD4-211ENST00000590499 ZNF789Q5FWF6 425 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 RNF187Q5TA31 235 aaPredicted RBP10.86□□□□□ -0.67
SMAD4-211ENST00000590499 ARHGAP40Q5TG30 622 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 NEPROQ6NW34 567 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 CASC4Q6P4E1 433 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 PCSK4Q6UW60 755 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 CCDC81Q6ZN84 652 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 SYDE1Q6ZW31 735 aaPredicted RBP10.86□□□□□ -0.67
SMAD4-211ENST00000590499 TIPARPQ7Z3E1 657 aaKnown RBP10.86□□□□□ -0.67
SMAD4-211ENST00000590499 HOOK3Q86VS8 718 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 AMIGO1Q86WK6 493 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 ADGRF3Q8IZF5 1079 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 C17orf53Q8N3J3 647 aaPredicted RBP10.86□□□□□ -0.67
SMAD4-211ENST00000590499 ASZ1Q8WWH4 475 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 RUNDC3BQ96NL0 473 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 PANX3Q96QZ0 392 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 OR6C1Q96RD1 312 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 MENTQ9BUN1 341 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms