RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 ZFP36L1Q07352 338 aaKnown RBP16.31■□□□□ 0.2
LSM14A-208ENST00000590416 TRA2AQ13595 282 aaKnown RBP eCLIP16.31■□□□□ 0.2
LSM14A-208ENST00000590416 TSTA3Q13630 321 aaPredicted RBP16.31■□□□□ 0.2
LSM14A-208ENST00000590416 CYHR1Q6ZMK1 362 aa16.31■□□□□ 0.2
LSM14A-208ENST00000590416 CMC1Q7Z7K0 106 aa16.31■□□□□ 0.2
LSM14A-208ENST00000590416 OR9A1PQ8NGU1 263 aa16.31■□□□□ 0.2
LSM14A-208ENST00000590416 ASB11Q8WXH4 323 aa16.31■□□□□ 0.2
LSM14A-208ENST00000590416 GRAMD1AQ96CP6 724 aa16.31■□□□□ 0.2
LSM14A-208ENST00000590416 CMKLR1Q99788 373 aa16.31■□□□□ 0.2
LSM14A-208ENST00000590416 ACTR10Q9NZ32 417 aa16.31■□□□□ 0.2
LSM14A-208ENST00000590416 SATB2Q9UPW6 733 aa16.31■□□□□ 0.2
LSM14A-208ENST00000590416 MSRB2Q9Y3D2 182 aa16.31■□□□□ 0.2
LSM14A-208ENST00000590416 LOXL2Q9Y4K0 774 aa16.31■□□□□ 0.2
LSM14A-208ENST00000590416 AK5Q9Y6K8 562 aa16.31■□□□□ 0.2
LSM14A-208ENST00000590416 KNTC1P50748 2209 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 NPEPPSL1A6NEC2 478 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 KRT38O76015 456 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 C9P02748 559 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 CHRM5P08912 532 aaPredicted RBP16.3■□□□□ 0.2
LSM14A-208ENST00000590416 HIST1H2AGP0C0S8 130 aaPredicted RBP16.3■□□□□ 0.2
LSM14A-208ENST00000590416 JMJD7P0C870 316 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 HIST1H2ADP20671 130 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 ARL4DP49703 201 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 SERPINB8P50452 374 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 GABREP78334 506 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 SP140Q13342 867 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 NAA30Q147X3 362 aaPredicted RBP16.3■□□□□ 0.2
LSM14A-208ENST00000590416 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.3■□□□□ 0.2
LSM14A-208ENST00000590416 TMEM207Q6UWW9 146 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 FRA10AC1Q70Z53 315 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 RAB11FIP2Q7L804 512 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 FAM129CQ86XR2 697 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 ADGRF3Q8IZF5 1079 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 FBXO39Q8N4B4 442 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 LMNTD1Q8N9Z9 388 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 WDR36Q8NI36 951 aaKnown RBP16.3■□□□□ 0.2
LSM14A-208ENST00000590416 MCOLN3Q8TDD5 553 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 LIN37Q96GY3 246 aaPredicted RBP16.3■□□□□ 0.2
LSM14A-208ENST00000590416 HIST1H2AHQ96KK5 128 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 PKP4Q99569 1192 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 MAP3K3Q99759 626 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 HIST1H2AJQ99878 128 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 H2AFJQ9BTM1 129 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 TRIM54Q9BYV2 358 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 UNKQ9C0B0 810 aaKnown RBP16.3■□□□□ 0.2
LSM14A-208ENST00000590416 RAB33BQ9H082 229 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 RRAGDQ9NQL2 400 aaPredicted RBP16.3■□□□□ 0.2
LSM14A-208ENST00000590416 ABCF3Q9NUQ8 709 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 OR6C2Q9NZP2 312 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 SPATA7Q9P0W8 599 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 EPHA6Q9UF33 1036 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 ADAMTS6Q9UKP5 1117 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 WASF3Q9UPY6 502 aa16.3■□□□□ 0.2
LSM14A-208ENST00000590416 TLCD2A6NGC4 264 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 ZNF839A8K0R7 811 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 GFYI3L273 518 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 SLC16A5O15375 505 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 KIF1CO43896 1103 aaKnown RBP16.29■□□□□ 0.2
LSM14A-208ENST00000590416 TSPAN12O95859 305 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 MPOP05164 745 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 CCDC166P0CW27 439 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 TPBGLP0DKB5 382 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 CRABP2P29373 138 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 KPNA2P52292 529 aaKnown RBP16.29■□□□□ 0.2
LSM14A-208ENST00000590416 CSHL1Q14406 222 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 C16orf72Q14CZ0 275 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 TAF1BQ53T94 588 aaPredicted RBP16.29■□□□□ 0.2
LSM14A-208ENST00000590416 LGSNQ5TDP6 509 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 ANKS6Q68DC2 871 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 EMBQ6PCB8 327 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 TBC1D1Q86TI0 1168 aaPredicted RBP16.29■□□□□ 0.2
LSM14A-208ENST00000590416 SPATA6LQ8N4H0 392 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 AGBL5Q8NDL9 886 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 OR2L8Q8NGY9 312 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 ANKRD49Q8WVL7 239 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 NXPE2Q96DL1 559 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 CD180Q99467 661 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 PARVBQ9HBI1 364 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 SNX15Q9NRS6 342 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 SOHLH2Q9NX45 425 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 CTNNAL1Q9UBT7 734 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 PISDQ9UG56 409 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 TLK1Q9UKI8 766 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 POMT2Q9UKY4 750 aa16.29■□□□□ 0.2
LSM14A-208ENST00000590416 PCM1Q15154 2024 aa16.28■□□□□ 0.2
LSM14A-208ENST00000590416 TRABD2BA6NFA1 517 aa16.28■□□□□ 0.2
LSM14A-208ENST00000590416 EFCAB7A8K855 629 aa16.28■□□□□ 0.2
LSM14A-208ENST00000590416 MYO1CO00159 1063 aa16.28■□□□□ 0.2
LSM14A-208ENST00000590416 HGSO14964 777 aaPredicted RBP16.28■□□□□ 0.2
LSM14A-208ENST00000590416 HGFP14210 728 aa16.28■□□□□ 0.2
LSM14A-208ENST00000590416 UGT2B7P16662 529 aa16.28■□□□□ 0.2
LSM14A-208ENST00000590416 CNTFP26441 200 aa16.28■□□□□ 0.2
LSM14A-208ENST00000590416 TYK2P29597 1187 aa16.28■□□□□ 0.2
LSM14A-208ENST00000590416 MAPK10P53779 464 aa16.28■□□□□ 0.2
LSM14A-208ENST00000590416 SHC2P98077 582 aa16.28■□□□□ 0.2
LSM14A-208ENST00000590416 EIF3IQ13347 325 aaKnown RBP16.28■□□□□ 0.2
LSM14A-208ENST00000590416 GRB7Q14451 532 aa16.28■□□□□ 0.2
LSM14A-208ENST00000590416 KIR2DS3Q14952 304 aa16.28■□□□□ 0.2
LSM14A-208ENST00000590416 ZKSCAN8Q15776 578 aaPredicted RBP16.28■□□□□ 0.2
LSM14A-208ENST00000590416 FBXO38Q6PIJ6 1188 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms