RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 FOXL2NBQ6ZUU3 175 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 NUDT13Q86X67 352 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 FAM114A1Q8IWE2 563 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 CRYBG2Q8N1P7 616 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 ZNF611Q8N823 705 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 IQUBQ8NA54 791 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 SLC4A11Q8NBS3 891 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 ZNF485Q8NCK3 441 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 TAF15Q92804 592 aaKnown RBP eCLIP3.23□□□□□ -1.89
SMAD4-207ENST00000589076 EXT2Q93063 718 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 MOB3AQ96BX8 217 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 DHX58Q96C10 678 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 ZNF558Q96NG5 402 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 VN1R1Q9GZP7 353 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 ARRDC1-AS1Q9H2J1 176 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 ZWILCHQ9H900 591 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 MYNNQ9NPC7 610 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 OLFML3Q9NRN5 406 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 SERINC1Q9NRX5 453 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 SLC38A7Q9NVC3 462 aa3.23□□□□□ -1.89
SMAD4-207ENST00000589076 CPSF3Q9UKF6 684 aaKnown RBP3.23□□□□□ -1.89
SMAD4-207ENST00000589076 COL2A1P02458 1487 aaPredicted RBP3.22□□□□□ -1.89
SMAD4-207ENST00000589076 A0A1W2PRB8 838 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 FAM172BPA6NC97 362 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 E9PI62 339 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 CAPN9O14815 690 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 RNASEH1O60930 286 aaKnown RBP3.22□□□□□ -1.89
SMAD4-207ENST00000589076 PENKP01210 267 aaPredicted RBP3.22□□□□□ -1.89
SMAD4-207ENST00000589076 ATP5BP06576 529 aaKnown RBP3.22□□□□□ -1.89
SMAD4-207ENST00000589076 SAGP10523 405 aaPredicted RBP3.22□□□□□ -1.89
SMAD4-207ENST00000589076 ACP2P11117 423 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 CETPP11597 493 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 CDC25CP30307 473 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 HOXC13P31276 330 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 THOP1P52888 689 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 MAPK12P53778 367 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 RBP5P82980 135 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 PPARDQ03181 441 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 MBTD1Q05BQ5 628 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 ARL16Q0P5N6 197 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 ILF3Q12906 894 aaKnown RBP eCLIP3.22□□□□□ -1.89
SMAD4-207ENST00000589076 BFSP1Q12934 665 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 SCARB2Q14108 478 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 ALDH1L2Q3SY69 923 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 C6orf136Q5SQH8 315 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 SUSD1Q6UWL2 747 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 PET117Q6UWS5 81 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 FAM47EQ6ZV65 393 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 TMPRSS11BQ86T26 416 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 SLC9B2Q86UD5 537 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 CCAR2Q8N163 923 aaKnown RBP3.22□□□□□ -1.89
SMAD4-207ENST00000589076 DMBX1Q8NFW5 382 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 OR13A1Q8NGR1 328 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 SPATA20Q8TB22 786 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 DEPDC1BQ8WUY9 529 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 CCDC107Q8WV48 283 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 SSMEM1Q8WWF3 244 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 SYN2Q92777 582 aaPredicted RBP3.22□□□□□ -1.89
SMAD4-207ENST00000589076 FAM162AQ96A26 154 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 SPSB1Q96BD6 273 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 RMDN2Q96LZ7 410 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 FERMT1Q9BQL6 677 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 MGME1Q9BQP7 344 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 FAM129AQ9BZQ8 928 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 MMP28Q9H239 520 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 TBC1D7Q9P0N9 293 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 B3GAT1Q9P2W7 334 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 LRWD1Q9UFC0 647 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 GTF3C4Q9UKN8 822 aa3.22□□□□□ -1.89
SMAD4-207ENST00000589076 A0A087WV48 116 aa3.21□□□□□ -1.9
SMAD4-207ENST00000589076 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.21□□□□□ -1.9
SMAD4-207ENST00000589076 FAM170AA1A519 330 aa3.21□□□□□ -1.9
SMAD4-207ENST00000589076 FAM72CH0Y354 149 aa3.21□□□□□ -1.9
SMAD4-207ENST00000589076 GAPDHSO14556 408 aaPredicted RBP3.21□□□□□ -1.9
SMAD4-207ENST00000589076 SYNCRIPO60506 623 aaKnown RBP3.21□□□□□ -1.9
SMAD4-207ENST00000589076 TBX6O95947 436 aaPredicted RBP3.21□□□□□ -1.9
SMAD4-207ENST00000589076 PAK4O96013 591 aaPredicted RBP3.21□□□□□ -1.9
SMAD4-207ENST00000589076 ATP1A1P05023 1023 aaKnown RBP3.21□□□□□ -1.9
SMAD4-207ENST00000589076 INHBAP08476 426 aa3.21□□□□□ -1.9
SMAD4-207ENST00000589076 FGF5P12034 268 aa3.21□□□□□ -1.9
SMAD4-207ENST00000589076 PTPN3P26045 913 aa3.21□□□□□ -1.9
SMAD4-207ENST00000589076 LHX1P48742 406 aa3.21□□□□□ -1.9
SMAD4-207ENST00000589076 NPY4RP50391 375 aa3.21□□□□□ -1.9
SMAD4-207ENST00000589076 BMXP51813 675 aa3.21□□□□□ -1.9
SMAD4-207ENST00000589076 ATP12AP54707 1039 aa3.21□□□□□ -1.9
SMAD4-207ENST00000589076 CX3CL1P78423 397 aa3.21□□□□□ -1.9
SMAD4-207ENST00000589076 MAT1AQ00266 395 aaKnown RBP3.21□□□□□ -1.9
SMAD4-207ENST00000589076 SYT14P1Q58G82 188 aa3.21□□□□□ -1.9
SMAD4-207ENST00000589076 FAM72AQ5TYM5 149 aa3.21□□□□□ -1.9
SMAD4-207ENST00000589076 FAM72DQ6L9T8 149 aa3.21□□□□□ -1.9
SMAD4-207ENST00000589076 C11orf63Q6NUN7 778 aa3.21□□□□□ -1.9
SMAD4-207ENST00000589076 TRAT1Q6PIZ9 186 aa3.21□□□□□ -1.9
SMAD4-207ENST00000589076 DCLRE1AQ6PJP8 1040 aa3.21□□□□□ -1.9
SMAD4-207ENST00000589076 PPP1R21Q6ZMI0 780 aa3.21□□□□□ -1.9
SMAD4-207ENST00000589076 C11orf57Q6ZUT1 292 aaPredicted RBP3.21□□□□□ -1.9
SMAD4-207ENST00000589076 GLRX5Q86SX6 157 aa3.21□□□□□ -1.9
SMAD4-207ENST00000589076 ZNF554Q86TJ5 538 aa3.21□□□□□ -1.9
SMAD4-207ENST00000589076 NFE4Q86UQ8 179 aa3.21□□□□□ -1.9
SMAD4-207ENST00000589076 FAM72BQ86X60 149 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms