RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 AARSD1Q9BTE6 412 aaKnown RBP19.61■□□□□ 0.73
ATG4D-208ENST00000588667 VPS11Q9H270 941 aa19.61■□□□□ 0.73
ATG4D-208ENST00000588667 CCDC134Q9H6E4 229 aa19.61■□□□□ 0.73
ATG4D-208ENST00000588667 MVB12BQ9H7P6 319 aa19.61■□□□□ 0.73
ATG4D-208ENST00000588667 CAB39LQ9H9S4 337 aa19.61■□□□□ 0.73
ATG4D-208ENST00000588667 RDH14Q9HBH5 336 aa19.61■□□□□ 0.73
ATG4D-208ENST00000588667 GRID1Q9ULK0 1009 aa19.61■□□□□ 0.73
ATG4D-208ENST00000588667 PLLPQ9Y342 182 aa19.61■□□□□ 0.73
ATG4D-208ENST00000588667 CSO75390 466 aaKnown RBP19.6■□□□□ 0.73
ATG4D-208ENST00000588667 GSTA1P08263 222 aa19.6■□□□□ 0.73
ATG4D-208ENST00000588667 SAT1P21673 171 aa19.6■□□□□ 0.73
ATG4D-208ENST00000588667 CRABP2P29373 138 aa19.6■□□□□ 0.73
ATG4D-208ENST00000588667 PDX1P52945 283 aa19.6■□□□□ 0.73
ATG4D-208ENST00000588667 RAB10P61026 200 aa19.6■□□□□ 0.73
ATG4D-208ENST00000588667 TARDBPQ13148 414 aaKnown RBP eCLIP19.6■□□□□ 0.73
ATG4D-208ENST00000588667 ISXQ2M1V0 245 aa19.6■□□□□ 0.73
ATG4D-208ENST00000588667 NKAIN2Q5VXU1 208 aa19.6■□□□□ 0.73
ATG4D-208ENST00000588667 VRK3Q8IV63 474 aa19.6■□□□□ 0.73
ATG4D-208ENST00000588667 FAM136AQ96C01 138 aa19.6■□□□□ 0.73
ATG4D-208ENST00000588667 GRAMD1AQ96CP6 724 aa19.6■□□□□ 0.73
ATG4D-208ENST00000588667 NUDT22Q9BRQ3 303 aa19.6■□□□□ 0.73
ATG4D-208ENST00000588667 KLHL42Q9P2K6 505 aa19.6■□□□□ 0.73
ATG4D-208ENST00000588667 SLC17A7Q9P2U7 560 aa19.6■□□□□ 0.73
ATG4D-208ENST00000588667 MED16Q9Y2X0 877 aa19.6■□□□□ 0.73
ATG4D-208ENST00000588667 MSRB2Q9Y3D2 182 aa19.6■□□□□ 0.73
ATG4D-208ENST00000588667 CHD8Q9HCK8 2581 aa19.59■□□□□ 0.73
ATG4D-208ENST00000588667 UBXN7O94888 489 aa19.59■□□□□ 0.73
ATG4D-208ENST00000588667 C2P06681 752 aa19.59■□□□□ 0.73
ATG4D-208ENST00000588667 CSF2RBP32927 897 aa19.59■□□□□ 0.73
ATG4D-208ENST00000588667 MAPK9P45984 424 aa19.59■□□□□ 0.73
ATG4D-208ENST00000588667 PPM1FP49593 454 aaPredicted RBP19.59■□□□□ 0.73
ATG4D-208ENST00000588667 CLCN7P51798 805 aa19.59■□□□□ 0.73
ATG4D-208ENST00000588667 GBX1Q14549 363 aa19.59■□□□□ 0.73
ATG4D-208ENST00000588667 PLCL1Q15111 1095 aa19.59■□□□□ 0.73
ATG4D-208ENST00000588667 CDHR3Q6ZTQ4 885 aa19.59■□□□□ 0.73
ATG4D-208ENST00000588667 USP53Q70EK8 1073 aa19.59■□□□□ 0.73
ATG4D-208ENST00000588667 LCA5Q86VQ0 697 aa19.59■□□□□ 0.73
ATG4D-208ENST00000588667 ZBTB2Q8N680 514 aa19.59■□□□□ 0.73
ATG4D-208ENST00000588667 ACVR1CQ8NER5 493 aa19.59■□□□□ 0.73
ATG4D-208ENST00000588667 CKAP2Q8WWK9 683 aa19.59■□□□□ 0.73
ATG4D-208ENST00000588667 TMEM74Q96NL1 305 aa19.59■□□□□ 0.73
ATG4D-208ENST00000588667 FAM111AQ96PZ2 611 aa19.59■□□□□ 0.73
ATG4D-208ENST00000588667 FERD3LQ96RJ6 166 aa19.59■□□□□ 0.73
ATG4D-208ENST00000588667 ZMYND15Q9H091 742 aa19.59■□□□□ 0.73
ATG4D-208ENST00000588667 ASF1AQ9Y294 204 aa19.59■□□□□ 0.73
ATG4D-208ENST00000588667 VPS26AO75436 327 aa19.58■□□□□ 0.73
ATG4D-208ENST00000588667 CSRP3P50461 194 aa19.58■□□□□ 0.73
ATG4D-208ENST00000588667 ZKSCAN8Q15776 578 aaPredicted RBP19.58■□□□□ 0.73
ATG4D-208ENST00000588667 TTLL9Q3SXZ7 439 aa19.58■□□□□ 0.73
ATG4D-208ENST00000588667 HECTD2Q5U5R9 776 aa19.58■□□□□ 0.73
ATG4D-208ENST00000588667 FAM45BPQ6NSW5 357 aa19.58■□□□□ 0.73
ATG4D-208ENST00000588667 WDR74Q6RFH5 385 aaPredicted RBP19.58■□□□□ 0.73
ATG4D-208ENST00000588667 TMPRSS9Q7Z410 1059 aa19.58■□□□□ 0.73
ATG4D-208ENST00000588667 MARCH9Q86YJ5 346 aa19.58■□□□□ 0.73
ATG4D-208ENST00000588667 OR4D9Q8NGE8 314 aa19.58■□□□□ 0.73
ATG4D-208ENST00000588667 FAM45AQ8TCE6 357 aa19.58■□□□□ 0.73
ATG4D-208ENST00000588667 TSNARE1Q96NA8 513 aa19.58■□□□□ 0.73
ATG4D-208ENST00000588667 NDNQ99608 321 aa19.58■□□□□ 0.73
ATG4D-208ENST00000588667 GALPQ9UBC7 116 aa19.58■□□□□ 0.73
ATG4D-208ENST00000588667 VWA7Q9Y334 891 aa19.58■□□□□ 0.73
ATG4D-208ENST00000588667 AKAP13Q12802 2813 aa19.58■□□□□ 0.73
ATG4D-208ENST00000588667 TMX2-CTNND1H3BSU7 103 aa19.58■□□□□ 0.72
ATG4D-208ENST00000588667 PROS1P07225 676 aa19.58■□□□□ 0.72
ATG4D-208ENST00000588667 COL6A2P12110 1019 aa19.58■□□□□ 0.72
ATG4D-208ENST00000588667 CCKBRP32239 447 aa19.58■□□□□ 0.72
ATG4D-208ENST00000588667 ETV4P43268 484 aa19.58■□□□□ 0.72
ATG4D-208ENST00000588667 CAPZBP47756 277 aa19.58■□□□□ 0.72
ATG4D-208ENST00000588667 INHBCP55103 352 aa19.58■□□□□ 0.72
ATG4D-208ENST00000588667 TAS2R39P59534 338 aa19.58■□□□□ 0.72
ATG4D-208ENST00000588667 CFHR1Q03591 330 aa19.58■□□□□ 0.72
ATG4D-208ENST00000588667 RBM20Q5T481 1227 aaKnown RBP19.58■□□□□ 0.72
ATG4D-208ENST00000588667 UNC5DQ6UXZ4 953 aa19.58■□□□□ 0.72
ATG4D-208ENST00000588667 CCDC91Q7Z6B0 441 aa19.58■□□□□ 0.72
ATG4D-208ENST00000588667 B3GNT8Q7Z7M8 397 aa19.58■□□□□ 0.72
ATG4D-208ENST00000588667 SLITRK4Q8IW52 837 aa19.58■□□□□ 0.72
ATG4D-208ENST00000588667 TBC1D21Q8IYX1 336 aa19.58■□□□□ 0.72
ATG4D-208ENST00000588667 PHC3Q8NDX5 983 aa19.58■□□□□ 0.72
ATG4D-208ENST00000588667 OR5K2Q8NHB8 316 aa19.58■□□□□ 0.72
ATG4D-208ENST00000588667 GIMAP7Q8NHV1 300 aa19.58■□□□□ 0.72
ATG4D-208ENST00000588667 MAGEB18Q96M61 343 aa19.58■□□□□ 0.72
ATG4D-208ENST00000588667 EPN3Q9H201 632 aa19.58■□□□□ 0.72
ATG4D-208ENST00000588667 TRIT1Q9H3H1 467 aaKnown RBP19.58■□□□□ 0.72
ATG4D-208ENST00000588667 ACOT9Q9Y305 439 aa19.58■□□□□ 0.72
ATG4D-208ENST00000588667 ENTPD2Q9Y5L3 495 aa19.58■□□□□ 0.72
ATG4D-208ENST00000588667 TPRP12270 2363 aaKnown RBP19.57■□□□□ 0.72
ATG4D-208ENST00000588667 A0A087X1B8 175 aa19.57■□□□□ 0.72
ATG4D-208ENST00000588667 GMNCA6NCL1 334 aa19.57■□□□□ 0.72
ATG4D-208ENST00000588667 DHRS4L1P0CG22 281 aa19.57■□□□□ 0.72
ATG4D-208ENST00000588667 TYRP1P17643 537 aa19.57■□□□□ 0.72
ATG4D-208ENST00000588667 AMD1P17707 334 aa19.57■□□□□ 0.72
ATG4D-208ENST00000588667 ZFP36L1Q07352 338 aaKnown RBP19.57■□□□□ 0.72
ATG4D-208ENST00000588667 UGT3A1Q6NUS8 523 aa19.57■□□□□ 0.72
ATG4D-208ENST00000588667 TMEM71Q6P5X7 295 aa19.57■□□□□ 0.72
ATG4D-208ENST00000588667 KLHL35Q6PF15 583 aa19.57■□□□□ 0.72
ATG4D-208ENST00000588667 SIDT2Q8NBJ9 832 aaKnown RBP19.57■□□□□ 0.72
ATG4D-208ENST00000588667 OR5AR1Q8NGP9 310 aa19.57■□□□□ 0.72
ATG4D-208ENST00000588667 CD200R1Q8TD46 325 aa19.57■□□□□ 0.72
ATG4D-208ENST00000588667 NCSTNQ92542 709 aa19.57■□□□□ 0.72
ATG4D-208ENST00000588667 GPR21Q99679 349 aa19.57■□□□□ 0.72
ATG4D-208ENST00000588667 HGH1Q9BTY7 390 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms