RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 ABCA11PQ4W5N1 156 aa13.02□□□□□ -0.32
RAB11FIP4-210ENST00000585058 RUNDC3AQ59EK9 446 aa13.02□□□□□ -0.32
RAB11FIP4-210ENST00000585058 HID1Q8IV36 788 aa13.02□□□□□ -0.32
RAB11FIP4-210ENST00000585058 SLITRK4Q8IW52 837 aa13.02□□□□□ -0.32
RAB11FIP4-210ENST00000585058 ZBED6CLQ96FA7 236 aaPredicted RBP13.02□□□□□ -0.32
RAB11FIP4-210ENST00000585058 C12orf66Q96MD2 445 aa13.02□□□□□ -0.32
RAB11FIP4-210ENST00000585058 AMBNQ9NP70 447 aa13.02□□□□□ -0.32
RAB11FIP4-210ENST00000585058 FZD10Q9ULW2 581 aa13.02□□□□□ -0.32
RAB11FIP4-210ENST00000585058 SPIN1Q9Y657 262 aaPredicted RBP13.02□□□□□ -0.32
RAB11FIP4-210ENST00000585058 A0A0G2JN53 185 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 TAS2R39P59534 338 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 IRF9Q00978 393 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 CAP1Q01518 475 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 ZMYND11Q15326 602 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 TAF1AQ15573 450 aaPredicted RBP13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 TIGD6Q17RP2 521 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 DEFB115Q30KQ5 88 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 IQCCQ4KMZ1 466 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 EIPR1Q53HC9 387 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 CLEC12AQ5QGZ9 265 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 FUT10Q6P4F1 479 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 AMIGO1Q86WK6 493 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 RAB2BQ8WUD1 216 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 KLK6Q92876 244 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 TNFRSF25Q93038 417 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 NUSAP1Q9BXS6 441 aaKnown RBP13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 POLR2J3Q9H1A7 115 aaKnown RBP13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 SSU72Q9NP77 194 aaKnown RBP13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 ERVK-11Q9UQG0 969 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 OR2AT4A6NND4 320 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 GPR25O00155 361 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 CCKBRP32239 447 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 CCNHP51946 323 aaPredicted RBP13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 BLMHQ13867 455 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 C4orf46Q504U0 113 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 XKR4Q5GH76 650 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 VITQ6UXI7 678 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 CDK15Q96Q40 435 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 PCDHAC1Q9H158 963 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 CERS4Q9HA82 394 aa13.02□□□□□ -0.33
RAB11FIP4-210ENST00000585058 RENP00797 406 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 RLN2P04090 185 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 GNAZP19086 355 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 NSG1P42857 185 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 JAM2P57087 298 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 IL10RBQ08334 325 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 SCARB2Q14108 478 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 PRAMEF17Q5VTA0 474 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 RASGEF1AQ8N9B8 481 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 LRRC20Q8TCA0 184 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 TFAP2BQ92481 460 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 ACBD6Q9BR61 282 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 YIPF4Q9BSR8 244 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 MRPS30Q9NP92 439 aaKnown RBP13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 ARL5CA6NH57 179 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 PLOD2O00469 737 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 PPP1R11O60927 126 aaPredicted RBP13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 KDM4BO94953 1096 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 IFI30P13284 250 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 GRK5P34947 590 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 CTSOP43234 321 aaPredicted RBP13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 PTP4A2Q12974 167 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 OTOP2Q7RTS6 562 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 GLB1L3Q8NCI6 653 aaPredicted RBP13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 SLC25A36Q96CQ1 311 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 HNRNPABQ99729 332 aaKnown RBP13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 SLC28A3Q9HAS3 691 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 RC3H2Q9HBD1 1191 aaKnown RBP13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 AASSQ9UDR5 926 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 MLXQ9UH92 298 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 MEMO1Q9Y316 297 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 C9IYK1 514 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 EI24O14681 340 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 CPNE3O75131 537 aaKnown RBP13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 ZNF20P17024 532 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 CRISP3P54108 245 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 GJA9P57773 515 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 CHAF1BQ13112 559 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 TRMT10BQ6PF06 316 aaKnown RBP13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 C15orf52Q6ZUT6 534 aaKnown RBP13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 LRRC57Q8N9N7 239 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 SLC39A3Q9BRY0 314 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 PCBD2Q9H0N5 130 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 OR2AG1Q9H205 316 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 ADAP2Q9NPF8 381 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 SALL4Q9UJQ4 1053 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 NR2E1Q9Y466 385 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 MATN2O00339 956 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 UGT1A9O60656 530 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 OR2B6P58173 313 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 BANPQ8N9N5 519 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 EBF4Q9BQW3 602 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 UGT1A7Q9HAW7 530 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 UGT1A10Q9HAW8 530 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 UGT1A8Q9HAW9 530 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 FARSBQ9NSD9 589 aaKnown RBP13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 MED11Q9P086 117 aa13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 RPL36Q9Y3U8 105 aaKnown RBP13.01□□□□□ -0.33
RAB11FIP4-210ENST00000585058 RIPK3Q9Y572 518 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms