RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	C17orf62	Q9BQA9	187 aa		14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	LACRT	Q9GZZ8	138 aa		14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	R3HDM2	Q9Y2K5	976 aa	Known RBP	14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	AP1M2	Q9Y6Q5	423 aa		14.6	□□□□□ -0.07
SREBF1-222	ENST00000583732	SLC5A10	A0PJK1	596 aa		14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732		H3BMH7	237 aa		14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	OR1I1	O60431	355 aa		14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	ALOX12B	O75342	701 aa		14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	AP2A1	O95782	977 aa		14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	OR56A5	P0C7T3	313 aa		14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	ACADL	P28330	430 aa		14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	P3H1	Q32P28	736 aa		14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	DCAF10	Q5QP82	559 aa		14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	LYPLAL1	Q5VWZ2	237 aa		14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	RAD9B	Q6WBX8	426 aa		14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	PPP1R32	Q7Z5V6	425 aa		14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	IQCK	Q8N0W5	287 aa		14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	C2orf73	Q8N5S3	287 aa	Predicted RBP	14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	DNAAF3	Q8N9W5	541 aa		14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	OR5K2	Q8NHB8	316 aa		14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	PROKR1	Q8TCW9	393 aa		14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	SNRNP40	Q96DI7	357 aa	Known RBP	14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	TMEM121	Q9BTD3	319 aa		14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	ILKAP	Q9H0C8	392 aa	Predicted RBP	14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	ASF1B	Q9NVP2	202 aa		14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	CUEDC1	Q9NWM3	386 aa	Predicted RBP	14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	P4HTM	Q9NXG6	502 aa		14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	C5AR2	Q9P296	337 aa		14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	POLG2	Q9UHN1	485 aa		14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	AMFR	Q9UKV5	643 aa		14.59	□□□□□ -0.07
SREBF1-222	ENST00000583732	PCM1	Q15154	2024 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	TCRBV7S2A1N4T	A0A589	114 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	BHMG1	C9JSJ3	638 aa	Predicted RBP	14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	QSOX1	O00391	747 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	ZNF189	O75820	626 aa	Predicted RBP	14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	ALPP	P05187	535 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	MAG	P20916	626 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	ALAS2	P22557	587 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	COL8A1	P27658	744 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	MYBPC3	Q14896	1274 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	CYP2A13	Q16696	494 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	NKAIN1	Q4KMZ8	207 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	PACS1	Q6VY07	963 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	PEX26	Q7Z412	305 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	KIAA1328	Q86T90	577 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	DNAJC22	Q8N4W6	341 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	LRRC57	Q8N9N7	239 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	TTC13	Q8NBP0	860 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	OR2Y1	Q8NGV0	311 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	CFAP61	Q8NHU2	1237 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	LKAAEAR1	Q8TD35	194 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	CALR3	Q96L12	384 aa	Known RBP	14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	IP6K3	Q96PC2	410 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	NDC1	Q9BTX1	674 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	AP1M1	Q9BXS5	423 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	ZBTB20	Q9HC78	741 aa	Predicted RBP	14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	OR6C2	Q9NZP2	312 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	SLC2A6	Q9UGQ3	507 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	SRPK3	Q9UPE1	567 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	PLCL2	Q9UPR0	1127 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	B3GNT3	Q9Y2A9	372 aa		14.58	□□□□□ -0.08
SREBF1-222	ENST00000583732	SPTAN1	Q13813	2472 aa	Known RBP	14.57	□□□□□ -0.08
SREBF1-222	ENST00000583732	MROH6	A6NGR9	719 aa		14.57	□□□□□ -0.08
SREBF1-222	ENST00000583732	PSMD3	O43242	534 aa		14.57	□□□□□ -0.08
SREBF1-222	ENST00000583732	FTCD	O95954	541 aa		14.57	□□□□□ -0.08
SREBF1-222	ENST00000583732	GOT2	P00505	430 aa	Known RBP	14.57	□□□□□ -0.08
SREBF1-222	ENST00000583732	UMOD	P07911	640 aa		14.57	□□□□□ -0.08
SREBF1-222	ENST00000583732	VARS	P26640	1264 aa	Known RBP	14.57	□□□□□ -0.08
SREBF1-222	ENST00000583732	PKLR	P30613	574 aa		14.57	□□□□□ -0.08
SREBF1-222	ENST00000583732	SLC5A12	Q1EHB4	618 aa		14.57	□□□□□ -0.08
SREBF1-222	ENST00000583732	MRPL14	Q6P1L8	145 aa	Known RBP	14.57	□□□□□ -0.08
SREBF1-222	ENST00000583732	TLDC1	Q6P9B6	456 aa		14.57	□□□□□ -0.08
SREBF1-222	ENST00000583732	PPP1R21	Q6ZMI0	780 aa		14.57	□□□□□ -0.08
SREBF1-222	ENST00000583732	TTLL10	Q6ZVT0	673 aa		14.57	□□□□□ -0.08
SREBF1-222	ENST00000583732	VRK3	Q8IV63	474 aa		14.57	□□□□□ -0.08
SREBF1-222	ENST00000583732	UBL4B	Q8N7F7	174 aa		14.57	□□□□□ -0.08
SREBF1-222	ENST00000583732	OR13J1	Q8NGT2	312 aa		14.57	□□□□□ -0.08
SREBF1-222	ENST00000583732	ATG4A	Q8WYN0	398 aa		14.57	□□□□□ -0.08
SREBF1-222	ENST00000583732	INPP5D	Q92835	1189 aa		14.57	□□□□□ -0.08
SREBF1-222	ENST00000583732	HDAC10	Q969S8	669 aa		14.57	□□□□□ -0.08
SREBF1-222	ENST00000583732	IL17F	Q96PD4	163 aa		14.57	□□□□□ -0.08
SREBF1-222	ENST00000583732	PANX2	Q96RD6	677 aa		14.57	□□□□□ -0.08
SREBF1-222	ENST00000583732	ZNF552	Q9H707	407 aa	Predicted RBP	14.57	□□□□□ -0.08
SREBF1-222	ENST00000583732	EURL	Q9NYK6	297 aa		14.57	□□□□□ -0.08
SREBF1-222	ENST00000583732	ERRFI1	Q9UJM3	462 aa	Predicted RBP	14.57	□□□□□ -0.08
SREBF1-222	ENST00000583732	IQCF5	A8MTL0	148 aa		14.56	□□□□□ -0.08
SREBF1-222	ENST00000583732	BTNL10	A8MVZ5	291 aa		14.56	□□□□□ -0.08
SREBF1-222	ENST00000583732	KDM1A	O60341	852 aa		14.56	□□□□□ -0.08
SREBF1-222	ENST00000583732	IGHE	P01854	428 aa		14.56	□□□□□ -0.08
SREBF1-222	ENST00000583732	ITGA3	P26006	1051 aa		14.56	□□□□□ -0.08
SREBF1-222	ENST00000583732	GLRB	P48167	497 aa		14.56	□□□□□ -0.08
SREBF1-222	ENST00000583732	HSPA14	Q0VDF9	509 aa		14.56	□□□□□ -0.08
SREBF1-222	ENST00000583732	KLF1	Q13351	362 aa	Predicted RBP	14.56	□□□□□ -0.08
SREBF1-222	ENST00000583732	SEMA3A	Q14563	771 aa		14.56	□□□□□ -0.08
SREBF1-222	ENST00000583732	KIR2DS3	Q14952	304 aa		14.56	□□□□□ -0.08
SREBF1-222	ENST00000583732	ZNF787	Q6DD87	383 aa		14.56	□□□□□ -0.08
SREBF1-222	ENST00000583732	AFTPH	Q6ULP2	937 aa		14.56	□□□□□ -0.08
SREBF1-222	ENST00000583732	LINC00523	Q86TU6	105 aa		14.56	□□□□□ -0.08
SREBF1-222	ENST00000583732	METTL27	Q8N6F8	245 aa	Predicted RBP	14.56	□□□□□ -0.08
SREBF1-222	ENST00000583732	SLC35B2	Q8TB61	432 aa		14.56	□□□□□ -0.08

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms