RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 MRPS2Q9Y399 296 aaKnown RBP7.35□□□□□ -1.23
SMARCE1-217ENST00000580654 ZNF711Q9Y462 761 aa7.35□□□□□ -1.23
SMARCE1-217ENST00000580654 ASB1Q9Y576 335 aa7.35□□□□□ -1.23
SMARCE1-217ENST00000580654 HRH3Q9Y5N1 445 aa7.35□□□□□ -1.23
SMARCE1-217ENST00000580654 FAM90A27PA6NNH2 459 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 NPIPA5E9PKD4 350 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 FAM227AF5H4B4 570 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 USP1O94782 785 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 MT-CYBP00156 380 aaPredicted RBP7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 COX6A1P12074 109 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 TCF4P15884 667 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 CES1P23141 567 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 DNASE1P24855 282 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 PSMA2P25787 234 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 IL1R2P27930 398 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 NDUFS1P28331 727 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 HOXC12P31275 282 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 MTIF2P46199 727 aaKnown RBP7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 JAM2P57087 298 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 YBX1P67809 324 aaKnown RBP7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 MYBPHQ13203 477 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 OLIG2Q13516 323 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 DPYSL2Q16555 572 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 MAN2A1Q16706 1144 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 KRTCAP3Q53RY4 240 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 ATG9BQ674R7 924 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 DCUN1D2Q6PH85 259 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 SPESP1Q6UW49 350 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 TTLL10Q6ZVT0 673 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 PSTKQ8IV42 348 aaKnown RBP7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 SIAH3Q8IW03 269 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 DNAJC22Q8N4W6 341 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 ACVR1CQ8NER5 493 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 LILRB4Q8NHJ6 448 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 FLVCR1-AS1Q8TAF5 88 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 GDAP1Q8TB36 358 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 CCDC110Q8TBZ0 833 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 BRSK1Q8TDC3 778 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 LCN9Q8WX39 176 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 HDAC10Q969S8 669 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 CSPG4P5Q96PW8 444 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 TRIM51Q9BSJ1 452 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 TUBGCP2Q9BSJ2 902 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 POLDIP3Q9BY77 421 aaKnown RBP7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 CHRNA10Q9GZZ6 450 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 GANQ9H2C0 597 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 XKR8Q9H6D3 395 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 ZWILCHQ9H900 591 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 BPIFA1Q9NP55 256 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 RAD18Q9NS91 495 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 COQ3Q9NZJ6 369 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 LRFN1Q9P244 771 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 NPIPA1Q9UND3 350 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 TTLL3Q9Y4R7 772 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 SPO11Q9Y5K1 396 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 CUBNO60494 3623 aa7.34□□□□□ -1.23
SMARCE1-217ENST00000580654 ANKRD62A6NC57 917 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 ASPDHA6ND91 283 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 OR5H15A6NDH6 313 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 MGAT4DA6NG13 374 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 C2orf74A8MZ97 194 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 H3BRJ5 948 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 EPHB6O15197 1021 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 MATN3O15232 486 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 ASNA1O43681 348 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 SGTAO43765 313 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 MFSD11O43934 449 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 UGT1A9O60656 530 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 BMP10O95393 424 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 SERPINA7P05543 415 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 TPOP07202 933 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 ACPPP15309 386 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 ABOP16442 354 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 UGT2B7P16662 529 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 UGT1A6P19224 532 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 UGT1A1P22309 533 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 ALAS2P22557 587 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 CA4P22748 312 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 SOX5P35711 763 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 SPAM1P38567 509 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 CD86P42081 329 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 OR1D4P47884 311 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 ZNF135P52742 658 aaPredicted RBP7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 DLX5P56178 289 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 ALDH6A1Q02252 535 aaKnown RBP7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 GALNT2Q10471 571 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 MAMLD1Q13495 774 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 BECN1Q14457 450 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 ATP13A4Q4VNC1 1196 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 ZNF766Q5HY98 468 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 CEP128Q6ZU80 1094 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 DAAM2Q86T65 1068 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 PHC2Q8IXK0 858 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 ELOA2Q8IYF1 753 aaPredicted RBP7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 MCOLN2Q8IZK6 566 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 DDHD1Q8NEL9 900 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 OR52E1Q8NGJ3 308 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 OR2L2Q8NH16 312 aa7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 N4BP2L2Q92802 583 aaPredicted RBP7.33□□□□□ -1.24
SMARCE1-217ENST00000580654 OR2A14Q96R47 310 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms