RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 C3orf30Q96M34 536 aa12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CENPKQ9BS16 269 aa12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 MRPL1Q9BYD6 325 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PCDHAC1Q9H158 963 aa12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 VCX3BQ9H321 246 aa12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 VCX3AQ9NNX9 186 aa12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TM7SF3Q9NS93 570 aa12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ADA2Q9NZK5 511 aa12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 MMP17Q9ULZ9 603 aa12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 BTRCQ9Y297 605 aa12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 A0A1B0GTL3 188 aa12.4□□□□□ -0.43
CDK5RAP3-217ENST00000580287 SLC22A2O15244 555 aa12.4□□□□□ -0.43
CDK5RAP3-217ENST00000580287 RNGTTO60942 597 aaKnown RBP12.4□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ZNF8P17098 575 aaPredicted RBP12.4□□□□□ -0.43
CDK5RAP3-217ENST00000580287 NFKB2Q00653 900 aa12.4□□□□□ -0.43
CDK5RAP3-217ENST00000580287 FZD5Q13467 585 aa12.4□□□□□ -0.43
CDK5RAP3-217ENST00000580287 UGT3A1Q6NUS8 523 aa12.4□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PNCKQ6P2M8 343 aa12.4□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ADGRG6Q86SQ4 1221 aa12.4□□□□□ -0.43
CDK5RAP3-217ENST00000580287 TRAPPC5Q8IUR0 188 aa12.4□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PHYKPLQ8IUZ5 450 aa12.4□□□□□ -0.43
CDK5RAP3-217ENST00000580287 RHEBL1Q8TAI7 183 aa12.4□□□□□ -0.43
CDK5RAP3-217ENST00000580287 HMGCLL1Q8TB92 370 aa12.4□□□□□ -0.43
CDK5RAP3-217ENST00000580287 HHIPQ96QV1 700 aa12.4□□□□□ -0.43
CDK5RAP3-217ENST00000580287 COPS7BQ9H9Q2 264 aaPredicted RBP12.4□□□□□ -0.43
CDK5RAP3-217ENST00000580287 FAM170BA6NMN3 283 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 H0Y8X5 98 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PDLIM1O00151 329 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PLRG1O43660 514 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 SNX2O60749 519 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 GLULP15104 373 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 AOAHP28039 575 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PDHA2P29803 388 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ADSLP30566 484 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 CLDN2P57739 230 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 STX1BP61266 288 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 GALNT1Q10472 559 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ILF2Q12905 390 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 FLOT2Q14254 428 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 IRF4Q15306 451 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PUS10Q3MIT2 529 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 SBSNQ6UWP8 590 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 TRMT11Q7Z4G4 463 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ZNF547Q8IVP9 402 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 LILRA2Q8N149 483 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ZNF687Q8N1G0 1237 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 FAM160A2Q8N612 972 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 DCBLD1Q8N8Z6 715 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 BHLHE22Q8NFJ8 381 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ITFG2Q969R8 447 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 VPS35Q96QK1 796 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 SLC17A9Q9BYT1 436 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 CD274Q9NZQ7 290 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 NFKBIL1Q9UBC1 381 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 DNAJC15Q9Y5T4 150 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 FRYLO94915 3013 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PLXNB3Q9ULL4 1909 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 SYCE1LA8MT33 242 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 CFAP99D6REC4 459 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 AZIN1O14977 448 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PIP5K1BO14986 540 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 LATO43561 262 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 DNAJA2O60884 412 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 FUCA1P04066 466 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 LINC00032P0C843 101 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 SOX11P35716 441 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ATP6V0D1P61421 351 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 CLCQ05315 142 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 DPTQ07507 201 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 LSAMPQ13449 338 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 SQLEQ14534 574 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 TGFBIQ15582 683 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 RBBP7Q16576 425 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 FBXO43Q4G163 708 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 EOGTQ5NDL2 527 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 LDLRAP1Q5SW96 308 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PAOXQ6QHF9 649 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 GPSM1Q86YR5 675 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ADHFE1Q8IWW8 467 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 GALNT4Q8N4A0 578 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 TWIST2Q8WVJ9 160 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 JADE3Q92613 823 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 TPSD1Q9BZJ3 242 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 TRIM8Q9BZR9 551 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 KLHL4Q9C0H6 718 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 CD320Q9NPF0 282 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PRPF19Q9UMS4 504 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 TIMM22Q9Y584 194 aa12.39□□□□□ -0.43
CDK5RAP3-217ENST00000580287 AP1G1O43747 822 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 CD9P21926 228 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 DGKAP23743 735 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 GDF5P43026 501 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 YBX1P67809 324 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ABRQ12979 859 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 SGCGQ13326 291 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PTK2BQ14289 1009 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ANKS6Q68DC2 871 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ST13P4Q8IZP2 240 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PGAM4Q8N0Y7 254 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 FAM110BQ8TC76 370 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms