RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 GALNT11Q8NCW6 608 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 OR13J1Q8NGT2 312 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 SLC35B2Q8TB61 432 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 VPS37BQ9H9H4 285 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 ETNK1Q9HBU6 452 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 ZBTB20Q9HC78 741 aaPredicted RBP8.62□□□□□ -1.03
GGA3-207ENST00000578896 SLAMF7Q9NQ25 335 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 CASS4Q9NQ75 786 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 GPR83Q9NYM4 423 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 FEZ2Q9UHY8 353 aaPredicted RBP8.62□□□□□ -1.03
GGA3-207ENST00000578896 ZNF451Q9Y4E5 1061 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 MYO9AB2RTY4 2548 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 CRYBG3Q68DQ2 2970 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 HEATR5BQ9P2D3 2071 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 A0A0J9YY10 115 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 KRT87PA6NCN2 255 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 GOLGA6L9A6NEM1 432 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 BTNL10A8MVZ5 291 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 C9J4A7 227 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 LIN7AO14910 233 aaPredicted RBP8.61□□□□□ -1.03
GGA3-207ENST00000578896 MAP3K7O43318 606 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 IPO7O95373 1038 aaKnown RBP8.61□□□□□ -1.03
GGA3-207ENST00000578896 IFNB1P01574 187 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 FTH1P02794 183 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 ZSCAN5DPP0CG00 497 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 AGXTP21549 392 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 ALAS2P22557 587 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 MCM3P25205 808 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 COL8A1P27658 744 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 CCR7P32248 378 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 SHMT2P34897 504 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 GRIA3P42263 894 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 NSG1P42857 185 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 SNX1Q13596 522 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 ZNF534Q76KX8 674 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 MRGPREQ86SM8 312 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 RAB43Q86YS6 212 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 SPNS2Q8IVW8 549 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 TBC1D21Q8IYX1 336 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 DNAJC22Q8N4W6 341 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 CISD2Q8N5K1 135 aaKnown RBP8.61□□□□□ -1.03
GGA3-207ENST00000578896 METTL27Q8N6F8 245 aaPredicted RBP8.61□□□□□ -1.03
GGA3-207ENST00000578896 TMEM102Q8N9M5 508 aaPredicted RBP8.61□□□□□ -1.03
GGA3-207ENST00000578896 DNAAF3Q8N9W5 541 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 GLIS1Q8NBF1 620 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 TTC13Q8NBP0 860 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 OR6P1Q8NGX9 317 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 OR5K2Q8NHB8 316 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 PRR7Q8TB68 274 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.61□□□□□ -1.03
GGA3-207ENST00000578896 C1orf54Q8WWF1 131 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 LRRC45Q96CN5 670 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 TCTN2Q96GX1 697 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 SGSM3Q96HU1 749 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 GBP5Q96PP8 586 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 PPP1R2P1Q96PQ5 205 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 SYTL2Q9HCH5 934 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 SLC22A11Q9NSA0 550 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 IFT80Q9P2H3 777 aaPredicted RBP8.61□□□□□ -1.03
GGA3-207ENST00000578896 PLEKHB1Q9UF11 243 aaPredicted RBP8.61□□□□□ -1.03
GGA3-207ENST00000578896 GPN3Q9UHW5 284 aaPredicted RBP8.61□□□□□ -1.03
GGA3-207ENST00000578896 TSR3Q9UJK0 312 aaKnown RBP8.61□□□□□ -1.03
GGA3-207ENST00000578896 CAPN6Q9Y6Q1 641 aa8.61□□□□□ -1.03
GGA3-207ENST00000578896 ZSCAN9O15535 394 aaPredicted RBP8.6□□□□□ -1.03
GGA3-207ENST00000578896 PSMD3O43242 534 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 DPM1O60762 260 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 UMODP07911 640 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 HBQ1P09105 142 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 OR56A5P0C7T3 313 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 MSL3P1P0C860 447 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 MAGP20916 626 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 PSMA3P25788 255 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 FOLR3P41439 243 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 DCDP81605 110 aaKnown RBP8.6□□□□□ -1.03
GGA3-207ENST00000578896 HSPA14Q0VDF9 509 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 ITIH4Q14624 930 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 P3H1Q32P28 736 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 NKAIN1Q4KMZ8 207 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 TSTD2Q5T7W7 516 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 RHBDD2Q6NTF9 364 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 PPP1R21Q6ZMI0 780 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 SHISA6Q6ZSJ9 500 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 TTLL10Q6ZVT0 673 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 MED25Q71SY5 747 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 PPP1R32Q7Z5V6 425 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 LURAP1LQ8IV03 231 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 TMEM139Q8IV31 216 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 UBL4BQ8N7F7 174 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 LINC01555Q8NAE3 123 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 SPC24Q8NBT2 197 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 OR4L1Q8NH43 312 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 INPP5DQ92835 1189 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.6□□□□□ -1.03
GGA3-207ENST00000578896 SNRNP40Q96DI7 357 aaKnown RBP8.6□□□□□ -1.03
GGA3-207ENST00000578896 MRFAP1L1Q96HT8 127 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 SMAD5Q99717 465 aaKnown RBP8.6□□□□□ -1.03
GGA3-207ENST00000578896 BAG1Q99933 345 aaPredicted RBP8.6□□□□□ -1.03
GGA3-207ENST00000578896 C19orf43Q9BQ61 176 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 MESP1Q9BRJ9 268 aa8.6□□□□□ -1.03
GGA3-207ENST00000578896 AP1M1Q9BXS5 423 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms