RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 DNAJB12Q9NXW2 375 aaKnown RBP5.65□□□□□ -1.5
SMG6-219ENST00000575663 IL1RAPL1Q9NZN1 696 aa5.65□□□□□ -1.5
SMG6-219ENST00000575663 CTSFQ9UBX1 484 aa5.65□□□□□ -1.5
SMG6-219ENST00000575663 TMPRSS11EQ9UL52 423 aa5.65□□□□□ -1.5
SMG6-219ENST00000575663 PLCL2Q9UPR0 1127 aa5.65□□□□□ -1.5
SMG6-219ENST00000575663 SCINQ9Y6U3 715 aa5.65□□□□□ -1.5
SMG6-219ENST00000575663 NIPBLQ6KC79 2804 aaeCLIP5.65□□□□□ -1.51
SMG6-219ENST00000575663 PCM1Q15154 2024 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 TMEM191CA6NGB0 347 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 FAM90A27PA6NNH2 459 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 KIAA1324LA8MWY0 1029 aaPredicted RBP5.64□□□□□ -1.51
SMG6-219ENST00000575663 RASGRF2O14827 1237 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 DSCR3O14972 297 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 KDM1AO60341 852 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 WDPCPO95876 746 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 POLBP06746 335 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 MMP2P08253 660 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 INHBBP09529 407 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 RALBP11234 206 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 UGT2B7P16662 529 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 CXCR2P25025 360 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 CHRNB4P30926 498 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 SHMT2P34897 504 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 HMGCLP35914 325 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 GABRA4P48169 554 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 ADAM8P78325 824 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 OCA2Q04671 838 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 ZNF33BQ06732 778 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 IHHQ14623 411 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 ZIC1Q15915 447 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 PCSK7Q16549 785 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 BCL7AQ4VC05 210 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 HSP90AA4PQ58FG1 418 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 ZNF766Q5HY98 468 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 TMEM198Q66K66 360 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 NCBP2-AS2Q69YL0 99 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 FAM151BQ6UXP7 276 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 NAPRTQ6XQN6 538 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 COX15Q7KZN9 410 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 NDUFAF7Q7L592 441 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 CAMKMTQ7Z624 323 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 TRIM73Q86UV7 250 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 NT5DC3Q86UY8 548 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 PRIMA1Q86XR5 153 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 FAM20CQ8IXL6 584 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 CLYBLQ8N0X4 340 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 TTC29Q8NA56 475 aaPredicted RBP5.64□□□□□ -1.51
SMG6-219ENST00000575663 MLKLQ8NB16 471 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 CCNYQ8ND76 341 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 MYRIPQ8NFW9 859 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 MIEF2Q96C03 454 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 LINC00615Q96LM1 132 aaPredicted RBP5.64□□□□□ -1.51
SMG6-219ENST00000575663 TRIB3Q96RU7 358 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 DMRTA2Q96SC8 542 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 POLDIP3Q9BY77 421 aaKnown RBP5.64□□□□□ -1.51
SMG6-219ENST00000575663 NAT10Q9H0A0 1025 aaKnown RBP5.64□□□□□ -1.51
SMG6-219ENST00000575663 TRABDQ9H4I3 376 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 MVB12BQ9H7P6 319 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 VPS37BQ9H9H4 285 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 PCDH18Q9HCL0 1135 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 MRPL47Q9HD33 250 aaKnown RBP5.64□□□□□ -1.51
SMG6-219ENST00000575663 IL26Q9NPH9 171 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 KCNJ16Q9NPI9 418 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 SLC22A11Q9NSA0 550 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 CUTCQ9NTM9 273 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 C3orf18Q9UK00 162 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 PKP3Q9Y446 797 aa5.64□□□□□ -1.51
SMG6-219ENST00000575663 FAM237BA0A1B0GVD1 139 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 VSTM2BA6NLU5 285 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 TMCO5BA8MYB1 307 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 CFAP99D6REC4 459 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 NPIPA5E9PKD4 350 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 GPR39O43194 453 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 HCRTR1O43613 425 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 NDST3O95803 873 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 ONECUT2O95948 504 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 HOXD4P09016 255 aaPredicted RBP5.63□□□□□ -1.51
SMG6-219ENST00000575663 RARAP10276 462 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 COX6A1P12074 109 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 ICAM2P13598 275 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 ZNF24P17028 368 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 UGT1A1P22309 533 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 EEF1GP26641 437 aaKnown RBP5.63□□□□□ -1.51
SMG6-219ENST00000575663 IL1R2P27930 398 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 EEF1DP29692 281 aaKnown RBP5.63□□□□□ -1.51
SMG6-219ENST00000575663 CD151P48509 253 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 KLK7P49862 253 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 KLC1Q07866 573 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 AP1B1Q10567 949 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 GRM7Q14831 915 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 PAFAH1B3Q15102 231 aaKnown RBP5.63□□□□□ -1.51
SMG6-219ENST00000575663 SLC14A2Q15849 920 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 ATP13A4Q4VNC1 1196 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 ZC3H12BQ5HYM0 836 aaKnown RBP5.63□□□□□ -1.51
SMG6-219ENST00000575663 TCTE1Q5JU00 501 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 TXNRD3NBQ6F5E7 133 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 TMEM211Q6ICI0 200 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 SASS6Q6UVJ0 657 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 C3P1Q6ZMU1 363 aa5.63□□□□□ -1.51
SMG6-219ENST00000575663 NEK10Q6ZWH5 1172 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms