RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 ARCN1P48444 511 aaKnown RBP9.39□□□□□ -0.91
CCDC40-212ENST00000574799 NUDT6P53370 316 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 GPLD1P80108 840 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 GALK2Q01415 458 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 MVKQ03426 396 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 MAPKAPK3Q16644 382 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 UNC50Q53HI1 259 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 ZNF789Q5FWF6 425 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 NOMO2Q5JPE7 1267 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 TMPRSS11AQ6ZMR5 421 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 SERINC5Q86VE9 423 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 TMEM199Q8N511 208 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 OR6F1Q8NGZ6 308 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 METTL6Q8TCB7 284 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 DHRS9Q9BPW9 319 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 UCK2Q9BZX2 261 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 SLIRPQ9GZT3 109 aaKnown RBP9.39□□□□□ -0.91
CCDC40-212ENST00000574799 WDCPQ9H6R7 721 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 SDR39U1Q9NRG7 319 aaPredicted RBP9.39□□□□□ -0.91
CCDC40-212ENST00000574799 OPTCQ9UBM4 332 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 IKZF3Q9UKT9 509 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 LYVE1Q9Y5Y7 322 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 B8ZZF3 427 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 CXCR6O00574 342 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 SCO1O75880 301 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 MOCS2O96007 188 aaPredicted RBP9.39□□□□□ -0.91
CCDC40-212ENST00000574799 UBL4AP11441 157 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 PRKACAP17612 351 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 WARSP23381 471 aaKnown RBP9.39□□□□□ -0.91
CCDC40-212ENST00000574799 DNAJB2P25686 324 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 CCND3P30281 292 aaPredicted RBP9.39□□□□□ -0.91
CCDC40-212ENST00000574799 CPT1AP50416 773 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 CLCNKBP51801 687 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 NXNL2Q5VZ03 156 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 RGMBQ6NW40 437 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 CXCL17Q6UXB2 119 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 CLEC20AQ6ZU45 233 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 PLEKHM3Q6ZWE6 761 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 SPATA19Q7Z5L4 167 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 UNC93AQ86WB7 457 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 TMEM151AQ8N4L1 468 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 BEND7Q8N7W2 519 aaPredicted RBP9.39□□□□□ -0.91
CCDC40-212ENST00000574799 KLHDC9Q8NEP7 349 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 ANKRD49Q8WVL7 239 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 EDEM1Q92611 657 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 REXO5Q96IC2 774 aaKnown RBP9.39□□□□□ -0.91
CCDC40-212ENST00000574799 TEKT5Q96M29 485 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 RHNO1Q9BSD3 238 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 OGDHLQ9ULD0 1010 aa9.39□□□□□ -0.91
CCDC40-212ENST00000574799 MEIOCA2RUB1 952 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 C17orf102A2RUQ5 167 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 TMEM88BA6NKF7 163 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 TSPAN3O60637 253 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 ELP6Q0PNE2 266 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 CSTF3Q12996 717 aaKnown RBP9.38□□□□□ -0.91
CCDC40-212ENST00000574799 LRRC26Q2I0M4 334 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 SYPL2Q5VXT5 272 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 GPR153Q6NV75 609 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 FAM131AQ6UXB0 335 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 FAM86B1Q8N7N1 296 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 DTX3Q8N9I9 347 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 ZNF419Q96HQ0 510 aaPredicted RBP9.38□□□□□ -0.91
CCDC40-212ENST00000574799 KIFC1Q9BW19 673 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 ACOT13Q9NPJ3 140 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 DIABLOQ9NR28 239 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 IGSF5Q9NSI5 407 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 KCNN3Q9UGI6 736 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 TANC1Q9C0D5 1861 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 TRIM64BA6NI03 449 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 hCG_2039718K7EN88 272 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 SERPINA1P01009 418 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 ITGB1P05556 798 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 HRH2P25021 359 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 ADRA1BP35368 520 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 TIE1P35590 1138 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 POLD2P49005 469 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 ISL1P61371 349 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 SCN1BQ07699 218 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 CACNB2Q08289 660 aaPredicted RBP9.38□□□□□ -0.91
CCDC40-212ENST00000574799 DSC3Q14574 896 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 SOWAHCQ53LP3 525 aaPredicted RBP9.38□□□□□ -0.91
CCDC40-212ENST00000574799 RAB41Q5JT25 222 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 B3GNT8Q7Z7M8 397 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 OR8H3Q8N146 312 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 AADATQ8N5Z0 425 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 TOR1AIP2Q8NFQ8 470 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 BLOC1S5Q8TDH9 187 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 MYDGFQ969H8 173 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 GPR78Q96P69 363 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 NEDD4LQ96PU5 975 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 MRPL9Q9BYD2 267 aaKnown RBP9.38□□□□□ -0.91
CCDC40-212ENST00000574799 POLR3HQ9Y535 204 aaPredicted RBP9.38□□□□□ -0.91
CCDC40-212ENST00000574799 NUP205Q92621 2012 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 MANSC4A6NHS7 340 aaPredicted RBP9.38□□□□□ -0.91
CCDC40-212ENST00000574799 TARM1B6A8C7 271 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 FAM72CH0Y354 149 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 CTDSP2O14595 271 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 LZTS3O60299 673 aaPredicted RBP9.38□□□□□ -0.91
CCDC40-212ENST00000574799 DUSP11O75319 330 aaKnown RBP9.38□□□□□ -0.91
CCDC40-212ENST00000574799 OR2B3O76000 313 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms