RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 FADS3Q9Y5Q0 445 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 ZSWIM8A7E2V4 1837 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 A0A0J9YVX5 310 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 PRR5-ARHGAP8B1AHC4 643 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 NPHS1O60500 1241 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 CHRNGP07510 517 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 POLR2CP19387 275 aaPredicted RBP9.87□□□□□ -0.83
SMG6-213ENST00000573166 PPP2R1BP30154 601 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 CCR8P51685 355 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 SLC18A2Q05940 514 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 FCHO2Q0JRZ9 810 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 SWT1Q5T5J6 900 aaKnown RBP9.87□□□□□ -0.83
SMG6-213ENST00000573166 GPR180Q86V85 440 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 DEFB107AQ8IZN7 70 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 TNIP2Q8NFZ5 429 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 OLFM1Q99784 485 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 YY1AP1Q9H869 796 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 FAF1Q9UNN5 650 aaPredicted RBP9.87□□□□□ -0.83
SMG6-213ENST00000573166 HTRA2O43464 458 aaPredicted RBP9.87□□□□□ -0.83
SMG6-213ENST00000573166 CD38P28907 300 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 RPL3P39023 403 aaKnown RBP9.87□□□□□ -0.83
SMG6-213ENST00000573166 MMP12P39900 470 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 CDK3Q00526 305 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 CYP4F3Q08477 520 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 FLOT2Q14254 428 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 MINDY4Q4G0A6 757 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 PHF19Q5T6S3 580 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 C9orf64Q5T6V5 341 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 THOC6Q86W42 341 aaKnown RBP9.87□□□□□ -0.83
SMG6-213ENST00000573166 OTUB1Q96FW1 271 aaPredicted RBP9.87□□□□□ -0.83
SMG6-213ENST00000573166 C7orf26Q96N11 449 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 STOML2Q9UJZ1 356 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 KLHL33A6NCF5 533 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 SLC35E2BP0CK96 405 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 TPMTP51580 245 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 AP2B1P63010 937 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 SP140Q13342 867 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 LRRC36Q1X8D7 754 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 ATAD3BQ5T9A4 648 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 VWA5B1Q5TIE3 1220 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 CAPRIN2Q6IMN6 1127 aaKnown RBP9.87□□□□□ -0.83
SMG6-213ENST00000573166 YTHDF3Q7Z739 585 aaKnown RBP9.87□□□□□ -0.83
SMG6-213ENST00000573166 MCCC1Q96RQ3 725 aaPredicted RBP9.87□□□□□ -0.83
SMG6-213ENST00000573166 TSC22D3Q99576 134 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 TREX1Q9NSU2 369 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 MICAL3Q7RTP6 2002 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 SYPP08247 313 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 POU2F2P09086 479 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 ANXA4P09525 319 aaPredicted RBP9.87□□□□□ -0.83
SMG6-213ENST00000573166 C1SP09871 688 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 MYCLP1P12525 358 aaPredicted RBP9.87□□□□□ -0.83
SMG6-213ENST00000573166 IDO1P14902 403 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 NUDT1P36639 197 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 PNLIPRP1P54315 467 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 RPS14P62263 151 aaKnown RBP9.87□□□□□ -0.83
SMG6-213ENST00000573166 PLPP6Q8IY26 295 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 RNF148Q8N7C7 305 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 ZFP28Q8NHY6 868 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 PDFQ9HBH1 243 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 ATXN10Q9UBB4 475 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 DMTF1Q9Y222 760 aa9.87□□□□□ -0.83
SMG6-213ENST00000573166 ARID2Q68CP9 1835 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 A0A0G2JN53 185 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 TPST1O60507 370 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 EPORP19235 508 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 ACSL1P33121 698 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 SHMT2P34897 504 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 GMPRP36959 345 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 NCALDP61601 193 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 STXBP1P61764 594 aaKnown RBP9.86□□□□□ -0.83
SMG6-213ENST00000573166 SQLEQ14534 574 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 TMEM196Q5HYL7 178 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 IL23RQ5VWK5 629 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 KIAA0895LQ68EN5 471 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 DENND5AQ6IQ26 1287 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 NEK5Q6P3R8 708 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 R3HCC1LQ7Z5L2 792 aaKnown RBP9.86□□□□□ -0.83
SMG6-213ENST00000573166 C11orf74Q86VG3 221 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 IL17RCQ8NAC3 791 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 PPCDCQ96CD2 204 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 HDAC8Q9BY41 377 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 LRRC3Q9BY71 257 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 MKRN2Q9H000 416 aaKnown RBP9.86□□□□□ -0.83
SMG6-213ENST00000573166 MYLK2Q9H1R3 596 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 RMI1Q9H9A7 625 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 PIP5K1BO14986 540 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 SNRPB2P08579 225 aaKnown RBP9.86□□□□□ -0.83
SMG6-213ENST00000573166 SEPHS1P49903 392 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 CTSCP53634 463 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 MAPK12P53778 367 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 SRP54P61011 504 aaKnown RBP9.86□□□□□ -0.83
SMG6-213ENST00000573166 AFMIDQ63HM1 303 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 LRRC70Q7Z2Q7 622 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 PRSS58Q8IYP2 241 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 JPH3Q8WXH2 748 aaPredicted RBP9.86□□□□□ -0.83
SMG6-213ENST00000573166 IL17FQ96PD4 163 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 SARDHQ9UL12 918 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 SNX7Q9UNH6 387 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 CYP7B1O75881 506 aa9.86□□□□□ -0.83
SMG6-213ENST00000573166 CSNK1EP49674 416 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms