RNA–Protein interactions for RNA: ENST00000570845.5

ATP2A3-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, human

TSL 1 (best)

Gene ATP2A3, Length 604 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2A3-208	ENST00000570845	PHGDH	O43175	533 aa	Known RBP	11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	ZBTB14	O43829	449 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	KIF1C	O43896	1103 aa	Known RBP	11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	RASSF9	O75901	435 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	TSPAN12	O95859	305 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	SYF2	O95926	243 aa	Known RBP	11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	C8G	P07360	202 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	MAP4	P27816	1152 aa	Known RBP	11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	MSH2	P43246	934 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	RAB28	P51157	221 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	RAB10	P61026	200 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	SHC2	P98077	582 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	SP140	Q13342	867 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	TRA2A	Q13595	282 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	NAA30	Q147X3	362 aa	Predicted RBP	11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	C16orf72	Q14CZ0	275 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	C3orf38	Q5JPI3	329 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	TAOK1	Q7L7X3	1001 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	CMC1	Q7Z7K0	106 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	ADGRF3	Q8IZF5	1079 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	NKAP	Q8N5F7	415 aa	Known RBP	11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	DCAKD	Q8WVC6	231 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	GRAMD1A	Q96CP6	724 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	LIN37	Q96GY3	246 aa	Predicted RBP	11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	IL17F	Q96PD4	163 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	RAB11FIP5	Q9BXF6	653 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	EPB41L4B	Q9H329	900 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	RRAGD	Q9NQL2	400 aa	Predicted RBP	11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	OR6C2	Q9NZP2	312 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	EPHA6	Q9UF33	1036 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	ADAMTS6	Q9UKP5	1117 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	POMT2	Q9UKY4	750 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	SATB2	Q9UPW6	733 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	MSRB2	Q9Y3D2	182 aa		11.21	□□□□□ -0.61
ATP2A3-208	ENST00000570845	TLCD2	A6NGC4	264 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	C2orf74	A8MZ97	194 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	MYO1C	O00159	1063 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	MATN2	O00339	956 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	HGS	O14964	777 aa	Predicted RBP	11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	CHRM5	P08912	532 aa	Predicted RBP	11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	CYP2A7	P20853	494 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	SERPINB9	P50453	376 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	KPNA2	P52292	529 aa	Known RBP	11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	CAMK2B	Q13554	666 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	ZKSCAN8	Q15776	578 aa	Predicted RBP	11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	CACHD1	Q5VU97	1274 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	FOXR1	Q6PIV2	292 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	RAPH1	Q70E73	1250 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	RAB11FIP2	Q7L804	512 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	PRSS42	Q7Z5A4	293 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	ARHGAP22	Q7Z5H3	698 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	TAX1BP1	Q86VP1	789 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	RASGRP3	Q8IV61	690 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	C2orf73	Q8N5S3	287 aa	Predicted RBP	11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	LMNTD1	Q8N9Z9	388 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	FBXO15	Q8NCQ5	510 aa	Predicted RBP	11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	OR9A1P	Q8NGU1	263 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	OR2L8	Q8NGY9	312 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	WDR36	Q8NI36	951 aa	Known RBP	11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	DENND1A	Q8TEH3	1009 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	AEN	Q8WTP8	325 aa	Known RBP	11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	ANKRD49	Q8WVL7	239 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	PDLIM5	Q96HC4	596 aa	Known RBP	11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	PKP4	Q99569	1192 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	MAP3K3	Q99759	626 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	MENT	Q9BUN1	341 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	ACTR10	Q9NZ32	417 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	AKAP7	Q9P0M2	348 aa	Predicted RBP	11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	SPATA7	Q9P0W8	599 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	PDP2	Q9P2J9	529 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	FREM2	Q5SZK8	3169 aa		11.2	□□□□□ -0.62
ATP2A3-208	ENST00000570845	NUP210L	Q5VU65	1888 aa		11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845		A0A1W2PNU3	283 aa	Predicted RBP	11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	HMX2	A2RU54	273 aa		11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	PMS2P1	A4D2B8	440 aa		11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	PABPN1L	A6NDY0	278 aa	Known RBP	11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	NPEPPSL1	A6NEC2	478 aa		11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	ISM1	B1AKI9	464 aa		11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	SLC16A5	O15375	505 aa		11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	TOX3	O15405	576 aa	Predicted RBP	11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	KRT38	O76015	456 aa		11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	WISP3	O95389	354 aa	Predicted RBP	11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	MPO	P05164	745 aa		11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	ANKRD34C	P0C6C1	535 aa		11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	SLC35E2B	P0CK96	405 aa		11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	CCDC166	P0CW27	439 aa		11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	UGT2B7	P16662	529 aa		11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	CDH3	P22223	829 aa		11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	CNTF	P26441	200 aa		11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	GCA	P28676	217 aa		11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	CRABP2	P29373	138 aa		11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	CSTF2	P33240	577 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	GMPR	P36959	345 aa		11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	HSD17B3	P37058	310 aa		11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	SEPHS1	P49903	392 aa		11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	SERPINB8	P50452	374 aa		11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	GABRE	P78334	506 aa		11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	EIF3I	Q13347	325 aa	Known RBP	11.19	□□□□□ -0.62
ATP2A3-208	ENST00000570845	ANKS6	Q68DC2	871 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms