RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 VCX3BQ9H321 246 aa6.09□□□□□ -1.43
LINC00556-201ENST00000569603 CATSPERBQ9H7T0 1116 aa6.09□□□□□ -1.43
LINC00556-201ENST00000569603 DDX18Q9NVP1 670 aaKnown RBP6.09□□□□□ -1.43
LINC00556-201ENST00000569603 KLHL14Q9P2G3 628 aa6.09□□□□□ -1.43
LINC00556-201ENST00000569603 UBA2Q9UBT2 640 aaPredicted RBP6.09□□□□□ -1.43
LINC00556-201ENST00000569603 TBC1D29Q9UFV1 150 aa6.09□□□□□ -1.43
LINC00556-201ENST00000569603 SLC13A4Q9UKG4 626 aa6.09□□□□□ -1.43
LINC00556-201ENST00000569603 GPR55Q9Y2T6 319 aaPredicted RBP6.09□□□□□ -1.43
LINC00556-201ENST00000569603 TMED5Q9Y3A6 229 aa6.09□□□□□ -1.43
LINC00556-201ENST00000569603 OR1A2Q9Y585 309 aa6.09□□□□□ -1.43
LINC00556-201ENST00000569603 ICE1Q9Y2F5 2266 aa6.09□□□□□ -1.44
LINC00556-201ENST00000569603 A0A087WV62 115 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 FADS2P1A8MWK0 482 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 DDX3XO00571 662 aaKnown RBP eCLIP6.08□□□□□ -1.44
LINC00556-201ENST00000569603 NVLO15381 856 aaKnown RBP6.08□□□□□ -1.44
LINC00556-201ENST00000569603 KLK10O43240 276 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 RIPK2O43353 540 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 KDM1AO60341 852 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 RECQL5O94762 991 aaPredicted RBP6.08□□□□□ -1.44
LINC00556-201ENST00000569603 TNFSF15O95150 251 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 POLBP06746 335 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 ANXA6P08133 673 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 ALPIP09923 528 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 ERCC2P18074 760 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 WT1P19544 449 aaPredicted RBP6.08□□□□□ -1.44
LINC00556-201ENST00000569603 LHCGRP22888 699 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 PSMA4P25789 261 aaKnown RBP6.08□□□□□ -1.44
LINC00556-201ENST00000569603 TEAD1P28347 426 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 SLC5A2P31639 672 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 UGT1A5P35504 534 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 BLKP51451 505 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 TPI1P60174 286 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 AP1S1P61966 158 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 CCL7P80098 99 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 B4GALNT1Q00973 533 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 RAD51Q06609 339 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 SLC10A7Q0GE19 358 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 SRSF6Q13247 344 aaKnown RBP6.08□□□□□ -1.44
LINC00556-201ENST00000569603 EIF3IQ13347 325 aaKnown RBP6.08□□□□□ -1.44
LINC00556-201ENST00000569603 RFTN1Q14699 578 aaPredicted RBP6.08□□□□□ -1.44
LINC00556-201ENST00000569603 NAA25Q14CX7 972 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 PCBP2Q15366 365 aaKnown RBP eCLIP6.08□□□□□ -1.44
LINC00556-201ENST00000569603 ELOCQ15369 112 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 DPYSL2Q16555 572 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 MAJINQ3KP22 176 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 LINC00303Q3SY05 128 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 SH2D4BQ5SQS7 431 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 ZNF362Q5T0B9 420 aaPredicted RBP6.08□□□□□ -1.44
LINC00556-201ENST00000569603 ERMARDQ5T6L9 678 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 ARHGAP40Q5TG30 622 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 FAXCQ5TGI0 409 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 FCRLBQ6BAA4 426 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 TXNRD3NBQ6F5E7 133 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 MRM1Q6IN84 353 aaKnown RBP6.08□□□□□ -1.44
LINC00556-201ENST00000569603 WDR73Q6P4I2 378 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 SHQ1Q6PI26 577 aaKnown RBP6.08□□□□□ -1.44
LINC00556-201ENST00000569603 IKBIPQ70UQ0 350 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 SLC7A5P1Q8MH63 180 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 EXD3Q8N9H8 876 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 NEK11Q8NG66 645 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 CCL4L1Q8NHW4 92 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 SLC35G2Q8TBE7 412 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 SGCDQ92629 289 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 KISS1RQ969F8 398 aaPredicted RBP6.08□□□□□ -1.44
LINC00556-201ENST00000569603 WDR92Q96MX6 357 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 TAAR9Q96RI9 348 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 MGME1Q9BQP7 344 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 ZPBPQ9BS86 351 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.08□□□□□ -1.44
LINC00556-201ENST00000569603 ACAT2Q9BWD1 397 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 TEX101Q9BY14 249 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 FRMD8Q9BZ67 464 aaPredicted RBP6.08□□□□□ -1.44
LINC00556-201ENST00000569603 TMEM168Q9H0V1 697 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 LIN28AQ9H9Z2 209 aaKnown RBP6.08□□□□□ -1.44
LINC00556-201ENST00000569603 MRPL40Q9NQ50 206 aaKnown RBP6.08□□□□□ -1.44
LINC00556-201ENST00000569603 PARVAQ9NVD7 372 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 ETNK2Q9NVF9 386 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 PPP1R14DQ9NXH3 145 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 EXTL2Q9UBQ6 330 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 KLQ9UEF7 1012 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 IPO11Q9UI26 975 aaKnown RBP6.08□□□□□ -1.44
LINC00556-201ENST00000569603 PTBP2Q9UKA9 531 aaKnown RBP6.08□□□□□ -1.44
LINC00556-201ENST00000569603 NENFQ9UMX5 172 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 EDARQ9UNE0 448 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 PPIL1Q9Y3C6 166 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 PCDHGB6Q9Y5F9 930 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 SPTBP11277 2137 aa6.08□□□□□ -1.44
LINC00556-201ENST00000569603 CNTRLQ7Z7A1 2325 aa6.07□□□□□ -1.44
LINC00556-201ENST00000569603 ABCA12Q86UK0 2595 aa6.07□□□□□ -1.44
LINC00556-201ENST00000569603 A0A1W2PPH5 198 aa6.07□□□□□ -1.44
LINC00556-201ENST00000569603 SSU72P8A0A1W2PR75 194 aa6.07□□□□□ -1.44
LINC00556-201ENST00000569603 CTAGE9A4FU28 777 aa6.07□□□□□ -1.44
LINC00556-201ENST00000569603 LRRC53A6NM62 1247 aa6.07□□□□□ -1.44
LINC00556-201ENST00000569603 CYSRT1A8MQ03 144 aa6.07□□□□□ -1.44
LINC00556-201ENST00000569603 EEF2KO00418 725 aaKnown RBP6.07□□□□□ -1.44
LINC00556-201ENST00000569603 B4GAT1O43505 415 aa6.07□□□□□ -1.44
LINC00556-201ENST00000569603 NUDT21O43809 227 aaKnown RBP6.07□□□□□ -1.44
LINC00556-201ENST00000569603 URI1O94763 535 aaPredicted RBP6.07□□□□□ -1.44
LINC00556-201ENST00000569603 HEXIM1O94992 359 aaKnown RBP6.07□□□□□ -1.44
LINC00556-201ENST00000569603 HRGP04196 525 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms