RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 RNF223E7ERA6 249 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 CDK2AP1O14519 115 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 TFECO14948 347 aaPredicted RBP6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 DSCR3O14972 297 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 POLR2DO15514 142 aaKnown RBP6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 NEURL1O76050 574 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 SUN1O94901 812 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 PDHA1P08559 390 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 ZGLP1P0C6A0 271 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 NDUFS1P28331 727 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 FMO5P49326 533 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 PAPOLAP51003 745 aaKnown RBP6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 ATP11AP98196 1134 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 SORDQ00796 357 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 IL10RBQ08334 325 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 XRCC4Q13426 336 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 DEFB110Q30KQ9 67 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 GXYLT1Q4G148 440 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 CMPK2Q5EBM0 449 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 ZNF569Q5MCW4 686 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 ACER2Q5QJU3 275 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 FAM102AQ5T9C2 384 aaPredicted RBP6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 PDPK2PQ6A1A2 396 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 UNC5DQ6UXZ4 953 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 TTLL10Q6ZVT0 673 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 AMZ2Q86W34 360 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 KIF18BQ86Y91 864 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 SHISA5Q8N114 240 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 RELL2Q8NC24 303 aaPredicted RBP6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 MCUQ8NE86 351 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 C16orf52Q8NHV5 167 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 LINC01560Q8TB33 94 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 STT3BQ8TCJ2 826 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 GLYATL1Q969I3 302 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 NTAN1Q96AB6 310 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 IMMP1LQ96LU5 166 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 LYSMD1Q96S90 227 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 INSM2Q96T92 566 aaPredicted RBP6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 EIF3CQ99613 913 aaKnown RBP6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 GTPBP4Q9BZE4 634 aaKnown RBP6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 DEF6Q9H4E7 631 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 SP110Q9HB58 689 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 PKD2L2Q9NZM6 624 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 C3orf18Q9UK00 162 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 PSMD13Q9UNM6 376 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 FAM215AQ9Y5M1 114 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 CFAP20Q9Y6A4 193 aaKnown RBP6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 PRR14LQ5THK1 2151 aa6.27□□□□□ -1.41
HERPUD1-217ENST00000569429 HYKKA2RU49 373 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 RCCD1A6NED2 376 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 BTN3A3O00478 584 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 BTN3A1O00481 513 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 DDX3XO00571 662 aaKnown RBP eCLIP6.26□□□□□ -1.412e-17■■■□□ 16.5
HERPUD1-217ENST00000569429 RASGRF2O14827 1237 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 FGF10O15520 208 aaPredicted RBP6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 HS6ST1O60243 411 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 NME2P1O60361 137 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 CDC40O60508 579 aaKnown RBP eCLIP6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 UGT1A1P22309 533 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 NME2P22392 152 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 CXCR2P25025 360 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 TAP2Q03519 686 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 EEF1A2Q05639 463 aaKnown RBP6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 SLC10A7Q0GE19 358 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 MESDQ14696 234 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 ZIC1Q15915 447 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 ACKR1Q16570 336 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 MAPKAPK3Q16644 382 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 MEP1AQ16819 746 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 RIPPLY2Q5TAB7 128 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 YOD1Q5VVQ6 348 aaPredicted RBP6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 METRNLQ641Q3 311 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 RTL6Q6ICC9 239 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 ACAD10Q6JQN1 1059 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 KDELC1Q6UW63 502 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 C20orf204Q6ZNR8 217 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 STRADAQ7RTN6 431 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 PYROXD2Q8N2H3 581 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 DNAJC22Q8N4W6 341 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 CCDC185Q8N715 623 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 BEND7Q8N7W2 519 aaPredicted RBP6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 MIEF2Q96C03 454 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 C18orf8Q96DM3 657 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 CELF6Q96J87 481 aaKnown RBP6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 ZNF599Q96NL3 588 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 DACH2Q96NX9 599 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 MGME1Q9BQP7 344 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 ZSCAN5AQ9BUG6 496 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 REG4Q9BYZ8 158 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 ZNF700Q9H0M5 742 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 SRMSQ9H3Y6 488 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 L2HGDHQ9H9P8 463 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 PNPLA3Q9NST1 481 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 IRAK4Q9NWZ3 460 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 ANKRD10Q9NXR5 420 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 DNMT3AQ9Y6K1 912 aaPredicted RBP6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 COLEC10Q9Y6Z7 277 aa6.26□□□□□ -1.41
HERPUD1-217ENST00000569429 MED12LQ86YW9 2145 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 IGLV3-12A0A075B6K2 115 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms