RNA–Protein interactions for RNA: ENST00000568488.5

CLK3-223, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-223ENST00000568488 PDHA2P29803 388 aa15.52■□□□□ 0.08
CLK3-223ENST00000568488 WNT3AP56704 352 aa15.52■□□□□ 0.08
CLK3-223ENST00000568488 PMP22Q01453 160 aa15.52■□□□□ 0.08
CLK3-223ENST00000568488 ZNF449Q6P9G9 518 aa15.52■□□□□ 0.08
CLK3-223ENST00000568488 UNC5AQ6ZN44 842 aa15.52■□□□□ 0.08
CLK3-223ENST00000568488 COX15Q7KZN9 410 aa15.52■□□□□ 0.08
CLK3-223ENST00000568488 PRSS58Q8IYP2 241 aa15.52■□□□□ 0.08
CLK3-223ENST00000568488 TFGQ92734 400 aaPredicted RBP15.52■□□□□ 0.08
CLK3-223ENST00000568488 C8orf44Q96CB5 159 aa15.52■□□□□ 0.08
CLK3-223ENST00000568488 FAF2Q96CS3 445 aa15.52■□□□□ 0.08
CLK3-223ENST00000568488 MAGED4Q96JG8 741 aa15.52■□□□□ 0.08
CLK3-223ENST00000568488 CRB3Q9BUF7 120 aa15.52■□□□□ 0.08
CLK3-223ENST00000568488 NUP62CLQ9H1M0 184 aa15.52■□□□□ 0.08
CLK3-223ENST00000568488 OR52A5Q9H2C5 316 aa15.52■□□□□ 0.08
CLK3-223ENST00000568488 COG4Q9H9E3 785 aa15.52■□□□□ 0.08
CLK3-223ENST00000568488 EURLQ9NYK6 297 aa15.52■□□□□ 0.08
CLK3-223ENST00000568488 CTSFQ9UBX1 484 aa15.52■□□□□ 0.08
CLK3-223ENST00000568488 NXT1Q9UKK6 140 aaKnown RBP15.52■□□□□ 0.08
CLK3-223ENST00000568488 ICKQ9UPZ9 632 aa15.52■□□□□ 0.08
CLK3-223ENST00000568488 LOC285095A0A1B0GVY8 99 aa15.51■□□□□ 0.07
CLK3-223ENST00000568488 ISM1B1AKI9 464 aa15.51■□□□□ 0.07
CLK3-223ENST00000568488 MAP2K7O14733 419 aa15.51■□□□□ 0.07
CLK3-223ENST00000568488 FAM155BO75949 473 aa15.51■□□□□ 0.07
CLK3-223ENST00000568488 ACPPP15309 386 aa15.51■□□□□ 0.07
CLK3-223ENST00000568488 OR1D4P47884 311 aa15.51■□□□□ 0.07
CLK3-223ENST00000568488 TEX44Q53QW1 395 aa15.51■□□□□ 0.07
CLK3-223ENST00000568488 NCCRP1Q6ZVX7 275 aaPredicted RBP15.51■□□□□ 0.07
CLK3-223ENST00000568488 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.51■□□□□ 0.07
CLK3-223ENST00000568488 DENND1AQ8TEH3 1009 aa15.51■□□□□ 0.07
CLK3-223ENST00000568488 PSMF1Q92530 271 aa15.51■□□□□ 0.07
CLK3-223ENST00000568488 RNF157Q96PX1 679 aa15.51■□□□□ 0.07
CLK3-223ENST00000568488 CHRNA10Q9GZZ6 450 aa15.51■□□□□ 0.07
CLK3-223ENST00000568488 ENKD1Q9H0I2 346 aa15.51■□□□□ 0.07
CLK3-223ENST00000568488 SLC26A1Q9H2B4 701 aa15.51■□□□□ 0.07
CLK3-223ENST00000568488 FAM153AQ9UHL3 310 aa15.51■□□□□ 0.07
CLK3-223ENST00000568488 CRLS1Q9UJA2 301 aa15.51■□□□□ 0.07
CLK3-223ENST00000568488 NSG1A0A0A6YYJ2 146 aa15.5■□□□□ 0.07
CLK3-223ENST00000568488 DSCR3O14972 297 aa15.5■□□□□ 0.07
CLK3-223ENST00000568488 WFS1O76024 890 aa15.5■□□□□ 0.07
CLK3-223ENST00000568488 CHRM5P08912 532 aaPredicted RBP15.5■□□□□ 0.07
CLK3-223ENST00000568488 PRR35P0CG20 571 aa15.5■□□□□ 0.07
CLK3-223ENST00000568488 SHMT2P34897 504 aa15.5■□□□□ 0.07
CLK3-223ENST00000568488 SOX11P35716 441 aa15.5■□□□□ 0.07
CLK3-223ENST00000568488 NSG1P42857 185 aa15.5■□□□□ 0.07
CLK3-223ENST00000568488 CD151P48509 253 aa15.5■□□□□ 0.07
CLK3-223ENST00000568488 PRLHRP49683 370 aa15.5■□□□□ 0.07
CLK3-223ENST00000568488 TAS2R40P59535 323 aa15.5■□□□□ 0.07
CLK3-223ENST00000568488 BOP1Q14137 746 aaKnown RBP15.5■□□□□ 0.07
CLK3-223ENST00000568488 PDK1Q15118 436 aa15.5■□□□□ 0.07
CLK3-223ENST00000568488 TFDP3Q5H9I0 405 aa15.5■□□□□ 0.07
CLK3-223ENST00000568488 E4F1Q66K89 784 aaPredicted RBP15.5■□□□□ 0.07
CLK3-223ENST00000568488 NPNTQ6UXI9 565 aa15.5■□□□□ 0.07
CLK3-223ENST00000568488 MCATQ8IVS2 390 aaKnown RBP15.5■□□□□ 0.07
CLK3-223ENST00000568488 PLD5Q8N7P1 536 aa15.5■□□□□ 0.07
CLK3-223ENST00000568488 CUTCQ9NTM9 273 aa15.5■□□□□ 0.07
CLK3-223ENST00000568488 AIPL1Q9NZN9 384 aa15.5■□□□□ 0.07
CLK3-223ENST00000568488 KLHL20Q9Y2M5 609 aa15.5■□□□□ 0.07
CLK3-223ENST00000568488 TDRKHQ9Y2W6 561 aaKnown RBP15.5■□□□□ 0.07
CLK3-223ENST00000568488 MEMO1Q9Y316 297 aa15.5■□□□□ 0.07
CLK3-223ENST00000568488 MAU2Q9Y6X3 613 aa15.5■□□□□ 0.07
CLK3-223ENST00000568488 ZNF469Q96JG9 3925 aaPredicted RBP15.49■□□□□ 0.07
CLK3-223ENST00000568488 LRRC10BA6NIK2 292 aa15.49■□□□□ 0.07
CLK3-223ENST00000568488 FAM227AF5H4B4 570 aa15.49■□□□□ 0.07
CLK3-223ENST00000568488 PPP1R12AO14974 1030 aaPredicted RBP15.49■□□□□ 0.07
CLK3-223ENST00000568488 SRP72O76094 671 aaKnown RBP15.49■□□□□ 0.07
CLK3-223ENST00000568488 WDPCPO95876 746 aa15.49■□□□□ 0.07
CLK3-223ENST00000568488 MYBL2P10244 700 aa15.49■□□□□ 0.07
CLK3-223ENST00000568488 ATP1B2P14415 290 aaPredicted RBP15.49■□□□□ 0.07
CLK3-223ENST00000568488 KDELR1P24390 212 aa15.49■□□□□ 0.07
CLK3-223ENST00000568488 PRKCIP41743 596 aa15.49■□□□□ 0.07
CLK3-223ENST00000568488 CARSP49589 748 aaKnown RBP15.49■□□□□ 0.07
CLK3-223ENST00000568488 FANCCQ00597 558 aa15.49■□□□□ 0.07
CLK3-223ENST00000568488 KDELC1Q6UW63 502 aa15.49■□□□□ 0.07
CLK3-223ENST00000568488 OR4K2Q8NGD2 314 aa15.49■□□□□ 0.07
CLK3-223ENST00000568488 OR5AR1Q8NGP9 310 aa15.49■□□□□ 0.07
CLK3-223ENST00000568488 FLVCR1-AS1Q8TAF5 88 aa15.49■□□□□ 0.07
CLK3-223ENST00000568488 RAPGEF5Q92565 580 aa15.49■□□□□ 0.07
CLK3-223ENST00000568488 TEKT5Q96M29 485 aa15.49■□□□□ 0.07
CLK3-223ENST00000568488 MAK16Q9BXY0 300 aaKnown RBP15.49■□□□□ 0.07
CLK3-223ENST00000568488 GSX1Q9H4S2 264 aaPredicted RBP15.49■□□□□ 0.07
CLK3-223ENST00000568488 FAM96AQ9H5X1 160 aa15.49■□□□□ 0.07
CLK3-223ENST00000568488 NCOA6Q14686 2063 aaPredicted RBP15.48■□□□□ 0.07
CLK3-223ENST00000568488 MAP1AP78559 2803 aaPredicted RBP15.48■□□□□ 0.07
CLK3-223ENST00000568488 CFAP99D6REC4 459 aa15.48■□□□□ 0.07
CLK3-223ENST00000568488 APOL1O14791 398 aa15.48■□□□□ 0.07
CLK3-223ENST00000568488 PRAMEF2O60811 474 aa15.48■□□□□ 0.07
CLK3-223ENST00000568488 ONECUT2O95948 504 aa15.48■□□□□ 0.07
CLK3-223ENST00000568488 EPOP01588 193 aa15.48■□□□□ 0.07
CLK3-223ENST00000568488 MCM3P25205 808 aa15.48■□□□□ 0.07
CLK3-223ENST00000568488 GCGRP47871 477 aa15.48■□□□□ 0.07
CLK3-223ENST00000568488 PPP2R2AP63151 447 aa15.48■□□□□ 0.07
CLK3-223ENST00000568488 KLC1Q07866 573 aa15.48■□□□□ 0.07
CLK3-223ENST00000568488 SLC1A5Q15758 541 aa15.48■□□□□ 0.07
CLK3-223ENST00000568488 NDUFAF7Q7L592 441 aa15.48■□□□□ 0.07
CLK3-223ENST00000568488 SPPL2CQ8IUH8 684 aa15.48■□□□□ 0.07
CLK3-223ENST00000568488 IPMKQ8NFU5 416 aa15.48■□□□□ 0.07
CLK3-223ENST00000568488 CA5BP1Q8WTZ4 195 aa15.48■□□□□ 0.07
CLK3-223ENST00000568488 MRGPRX2Q96LB1 330 aa15.48■□□□□ 0.07
CLK3-223ENST00000568488 COPS8Q99627 209 aa15.48■□□□□ 0.07
CLK3-223ENST00000568488 FKBPLQ9UIM3 349 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms