RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 CTRCQ99895 268 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 FAM129AQ9BZQ8 928 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 XKR8Q9H6D3 395 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 SMYD2Q9NRG4 433 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 C1GALT1Q9NS00 363 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 ZFATQ9P243 1243 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 KLHL42Q9P2K6 505 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 TDRKHQ9Y2W6 561 aaKnown RBP13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 DHRS7Q9Y394 339 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 PSAT1Q9Y617 370 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 NFS1Q9Y697 457 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 CHD6Q8TD26 2715 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 C2orf74A8MZ97 194 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 ZBTB11O95625 1053 aaPredicted RBP13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 CDH3P22223 829 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 PRDX3P30048 256 aaKnown RBP13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 ATP5DP30049 168 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 ECHS1P30084 290 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 ARL4DP49703 201 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 HSD11B2P80365 405 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 TIAL1Q01085 375 aaKnown RBP eCLIP13.4□□□□□ -0.265e-7■■■■□ 24.5
HERPUD1-210ENST00000565966 ACSBG2Q5FVE4 666 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 RBM20Q5T481 1227 aaKnown RBP13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 C3orf62Q6ZUJ4 267 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 CYS1Q717R9 158 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 BPHLQ86WA6 291 aaPredicted RBP13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 SLC26A11Q86WA9 606 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 ADGRF3Q8IZF5 1079 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 D2HGDHQ8N465 521 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 CFAP61Q8NHU2 1237 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 CD200R1Q8TD46 325 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 IFT81Q8WYA0 676 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 CRELD1Q96HD1 420 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 OR6C1Q96RD1 312 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 CCNL2Q96S94 520 aaPredicted RBP13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 NDNQ99608 321 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 GPR21Q99679 349 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 SPRY4Q9C004 299 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 PRORYQ9H606 182 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 LRRC4CQ9HCJ2 640 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 WDR70Q9NW82 654 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 OR6C2Q9NZP2 312 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 POMT2Q9UKY4 750 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 ICKQ9UPZ9 632 aa13.4□□□□□ -0.26
HERPUD1-210ENST00000565966 HEATR5BQ9P2D3 2071 aa13.4□□□□□ -0.27
HERPUD1-210ENST00000565966 TCRBV9S1A1TA0A576 114 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 PIPSLA2A3N6 862 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 FAM159BA6NKW6 160 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 ESPNB1AK53 854 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 VPS26AO75436 327 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 PIAS1O75925 651 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 C1QAP02745 245 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 FGF5P12034 268 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 ATP1A2P50993 1020 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 CXADRP78310 365 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 ACY1Q03154 408 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 CUL1Q13616 776 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 KYNUQ16719 465 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 KLHL38Q2WGJ6 581 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 TTLL9Q3SXZ7 439 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 MANEAQ5SRI9 462 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 TMTC4Q5T4D3 741 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 TTC23LQ6PF05 361 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 CCDC81Q6ZN84 652 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 STRA8Q7Z7C7 330 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 PPP1R3BQ86XI6 285 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 DCUN1D3Q8IWE4 304 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 SKA2Q8WVK7 121 aaPredicted RBP13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 INPP5DQ92835 1189 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 NKD1Q969G9 470 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 FOPNLQ96NB1 174 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 PDE7BQ9NP56 450 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 ACTR10Q9NZ32 417 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 MTRF1LQ9UGC7 380 aaKnown RBP13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 TSR3Q9UJK0 312 aaKnown RBP13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 PILRAQ9UKJ1 303 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 CORO1CQ9ULV4 474 aaPredicted RBP13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 RUVBL2Q9Y230 463 aaKnown RBP13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 TMEM184BQ9Y519 407 aaPredicted RBP13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 NBEAQ8NFP9 2946 aa13.39□□□□□ -0.27
HERPUD1-210ENST00000565966 ITPR1Q14643 2758 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 SLC9B1P1A6NJY1 282 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 CXorf49A8MYA2 514 aaPredicted RBP13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 MATN4O95460 622 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 C1orf105O95561 183 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 RHOXF2BP0C7M4 288 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 FOLR1P15328 257 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 CD9P21926 228 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 BDKRB1P46663 353 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 RAB28P51157 221 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 CDKN2DP55273 166 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 VAC14Q08AM6 782 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 GRB7Q14451 532 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 HECTD2Q5U5R9 776 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 FAM45BPQ6NSW5 357 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 UGT3A1Q6NUS8 523 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 FBXO38Q6PIJ6 1188 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 CYHR1Q6ZMK1 362 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 NEK10Q6ZWH5 1172 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 GPR155Q7Z3F1 870 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms