RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 ALS2CLQ60I27 953 aa15.38■□□□□ 0.05
RNF40-205ENST00000563909 ZNF385CQ66K41 422 aaPredicted RBP15.38■□□□□ 0.05
RNF40-205ENST00000563909 ITPRIPL1Q6GPH6 555 aa15.38■□□□□ 0.05
RNF40-205ENST00000563909 ZNF567Q8N184 647 aa15.38■□□□□ 0.05
RNF40-205ENST00000563909 CARFQ8N187 725 aa15.38■□□□□ 0.05
RNF40-205ENST00000563909 OR1N1Q8NGS0 311 aa15.38■□□□□ 0.05
RNF40-205ENST00000563909 NR4A3Q92570 626 aa15.38■□□□□ 0.05
RNF40-205ENST00000563909 GLYATL1Q969I3 302 aa15.38■□□□□ 0.05
RNF40-205ENST00000563909 TMEM121Q9BTD3 319 aa15.38■□□□□ 0.05
RNF40-205ENST00000563909 SLC25A51Q9H1U9 297 aa15.38■□□□□ 0.05
RNF40-205ENST00000563909 GSX1Q9H4S2 264 aaPredicted RBP15.38■□□□□ 0.05
RNF40-205ENST00000563909 EPS8L2Q9H6S3 715 aa15.38■□□□□ 0.05
RNF40-205ENST00000563909 SYTL2Q9HCH5 934 aa15.38■□□□□ 0.05
RNF40-205ENST00000563909 PSMD13Q9UNM6 376 aa15.38■□□□□ 0.05
RNF40-205ENST00000563909 SEC16AO15027 2179 aa15.38■□□□□ 0.05
RNF40-205ENST00000563909 FAM221AA4D161 298 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 TMEM200CA6NKL6 621 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 ANKRD66B4E2M5 251 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 E7EQ34 232 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 FANCGO15287 622 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 CBSLP0DN79 551 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 AGAP20933 346 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 CDH3P22223 829 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 CBSP35520 551 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 SMSP52788 366 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 ADORA2A-AS1P86434 159 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 NIPAL4Q0D2K0 466 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 QPCTQ16769 361 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 ANKRD20A2Q5SQ80 823 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 ANKRD20A1Q5TYW2 823 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 ANKRD20A3Q5VUR7 823 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 CREG2Q8IUH2 290 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 TMEM151BQ8IW70 566 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 PRELID2Q8N945 189 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 FAM71DQ8N9W8 422 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 IMP4Q96G21 291 aaKnown RBP15.37■□□□□ 0.05
RNF40-205ENST00000563909 CAPZA3Q96KX2 299 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 FCRL5Q96RD9 977 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 TAAR6Q96RI8 345 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 ZSCAN5AQ9BUG6 496 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 AP1M1Q9BXS5 423 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 SEMA3GQ9NS98 782 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 RSPH14Q9UHP6 348 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 FBXL4Q9UKA2 621 aa15.37■□□□□ 0.05
RNF40-205ENST00000563909 CLDN14O95500 239 aa15.36■□□□□ 0.05
RNF40-205ENST00000563909 UMODP07911 640 aa15.36■□□□□ 0.05
RNF40-205ENST00000563909 CD63P08962 238 aa15.36■□□□□ 0.05
RNF40-205ENST00000563909 NFKB1P19838 968 aa15.36■□□□□ 0.05
RNF40-205ENST00000563909 CD68P34810 354 aaPredicted RBP15.36■□□□□ 0.05
RNF40-205ENST00000563909 CD86P42081 329 aa15.36■□□□□ 0.05
RNF40-205ENST00000563909 GALNT3Q14435 633 aa15.36■□□□□ 0.05
RNF40-205ENST00000563909 SLC9A5Q14940 896 aa15.36■□□□□ 0.05
RNF40-205ENST00000563909 SLC14A2Q15849 920 aa15.36■□□□□ 0.05
RNF40-205ENST00000563909 CYP1B1Q16678 543 aa15.36■□□□□ 0.05
RNF40-205ENST00000563909 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.36■□□□□ 0.052e-8■■□□□ 13.3
RNF40-205ENST00000563909 P3H1Q32P28 736 aa15.36■□□□□ 0.05
RNF40-205ENST00000563909 KHDC1Q4VXA5 237 aaKnown RBP15.36■□□□□ 0.05
RNF40-205ENST00000563909 C1orf189Q5VU69 101 aa15.36■□□□□ 0.05
RNF40-205ENST00000563909 LINC00696Q6ZRV3 163 aa15.36■□□□□ 0.05
RNF40-205ENST00000563909 C11orf96Q7Z7L8 435 aa15.36■□□□□ 0.05
RNF40-205ENST00000563909 TGIF2LYQ8IUE0 185 aa15.36■□□□□ 0.05
RNF40-205ENST00000563909 TRAPPC5Q8IUR0 188 aa15.36■□□□□ 0.05
RNF40-205ENST00000563909 MAGOHBQ96A72 148 aaKnown RBP15.36■□□□□ 0.05
RNF40-205ENST00000563909 EID2BQ96D98 161 aa15.36■□□□□ 0.05
RNF40-205ENST00000563909 SPATA13Q96N96 652 aa15.36■□□□□ 0.05
RNF40-205ENST00000563909 PPP1R2P1Q96PQ5 205 aa15.36■□□□□ 0.05
RNF40-205ENST00000563909 REPIN1Q9BWE0 567 aaKnown RBP15.36■□□□□ 0.05
RNF40-205ENST00000563909 ZFYVE1Q9HBF4 777 aa15.36■□□□□ 0.05
RNF40-205ENST00000563909 SLC6A20Q9NP91 592 aa15.36■□□□□ 0.05
RNF40-205ENST00000563909 IMP3Q9NV31 184 aaKnown RBP15.36■□□□□ 0.05
RNF40-205ENST00000563909 SMARCAL1Q9NZC9 954 aa15.36■□□□□ 0.05
RNF40-205ENST00000563909 IFT80Q9P2H3 777 aaPredicted RBP15.36■□□□□ 0.05
RNF40-205ENST00000563909 NDOR1Q9UHB4 597 aa15.36■□□□□ 0.05
RNF40-205ENST00000563909 MAP3K7O43318 606 aa15.35■□□□□ 0.05
RNF40-205ENST00000563909 CNOT3O75175 753 aaKnown RBP15.35■□□□□ 0.05
RNF40-205ENST00000563909 MMP2P08253 660 aa15.35■□□□□ 0.05
RNF40-205ENST00000563909 ESRRAP11474 423 aaPredicted RBP15.35■□□□□ 0.05
RNF40-205ENST00000563909 POLR2CP19387 275 aaPredicted RBP15.35■□□□□ 0.05
RNF40-205ENST00000563909 KLK2P20151 261 aa15.35■□□□□ 0.05
RNF40-205ENST00000563909 GDF10P55107 478 aa15.35■□□□□ 0.05
RNF40-205ENST00000563909 PRPSAP1Q14558 356 aa15.35■□□□□ 0.05
RNF40-205ENST00000563909 ARHGEF18Q6ZSZ5 1173 aa15.35■□□□□ 0.05
RNF40-205ENST00000563909 GSTA5Q7RTV2 222 aa15.35■□□□□ 0.05
RNF40-205ENST00000563909 CCDC89Q8N998 374 aa15.35■□□□□ 0.05
RNF40-205ENST00000563909 GPR26Q8NDV2 337 aa15.35■□□□□ 0.05
RNF40-205ENST00000563909 CCDC110Q8TBZ0 833 aa15.35■□□□□ 0.05
RNF40-205ENST00000563909 TRIM56Q9BRZ2 755 aaKnown RBP15.35■□□□□ 0.05
RNF40-205ENST00000563909 ADGRE3Q9BY15 652 aa15.35■□□□□ 0.05
RNF40-205ENST00000563909 GBA3Q9H227 469 aa15.35■□□□□ 0.05
RNF40-205ENST00000563909 C1GALT1Q9NS00 363 aa15.35■□□□□ 0.05
RNF40-205ENST00000563909 SEC14L3Q9UDX4 400 aa15.35■□□□□ 0.05
RNF40-205ENST00000563909 FAM153AQ9UHL3 310 aa15.35■□□□□ 0.05
RNF40-205ENST00000563909 FEZ2Q9UHY8 353 aaPredicted RBP15.35■□□□□ 0.05
RNF40-205ENST00000563909 CDYLQ9Y232 598 aa15.35■□□□□ 0.05
RNF40-205ENST00000563909 CFAP20Q9Y6A4 193 aaKnown RBP15.35■□□□□ 0.05
RNF40-205ENST00000563909 CCDC88CQ9P219 2028 aa15.34■□□□□ 0.05
RNF40-205ENST00000563909 PHF2O75151 1096 aa15.34■□□□□ 0.05
RNF40-205ENST00000563909 ANXA9O76027 345 aa15.34■□□□□ 0.05
RNF40-205ENST00000563909 IFNB1P01574 187 aa15.34■□□□□ 0.05
RNF40-205ENST00000563909 MSL3P1P0C860 447 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms