RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 PRKG2Q13237 762 aa9.94□□□□□ -0.82
SF3B3-204ENST00000563739 C3AR1Q16581 482 aa9.94□□□□□ -0.82
SF3B3-204ENST00000563739 TAZQ16635 292 aa9.94□□□□□ -0.82
SF3B3-204ENST00000563739 HADHQ16836 314 aaKnown RBP9.94□□□□□ -0.82
SF3B3-204ENST00000563739 ISLR2Q6UXK2 745 aa9.94□□□□□ -0.82
SF3B3-204ENST00000563739 OVCH1Q7RTY7 1134 aa9.94□□□□□ -0.82
SF3B3-204ENST00000563739 GPR135Q8IZ08 494 aa9.94□□□□□ -0.82
SF3B3-204ENST00000563739 ADAMTS18Q8TE60 1221 aa9.94□□□□□ -0.82
SF3B3-204ENST00000563739 COG1Q8WTW3 980 aa9.94□□□□□ -0.82
SF3B3-204ENST00000563739 NACC2Q96BF6 587 aa9.94□□□□□ -0.82
SF3B3-204ENST00000563739 RBM41Q96IZ5 413 aaKnown RBP9.94□□□□□ -0.82
SF3B3-204ENST00000563739 THOC3Q96J01 351 aaKnown RBP9.94□□□□□ -0.82
SF3B3-204ENST00000563739 FERD3LQ96RJ6 166 aa9.94□□□□□ -0.82
SF3B3-204ENST00000563739 C17orf62Q9BQA9 187 aa9.94□□□□□ -0.82
SF3B3-204ENST00000563739 TMEM121Q9BTD3 319 aa9.94□□□□□ -0.82
SF3B3-204ENST00000563739 SOX17Q9H6I2 414 aaPredicted RBP9.94□□□□□ -0.82
SF3B3-204ENST00000563739 WDR54Q9H977 334 aa9.94□□□□□ -0.82
SF3B3-204ENST00000563739 PLA2G3Q9NZ20 509 aa9.94□□□□□ -0.82
SF3B3-204ENST00000563739 FAM153AQ9UHL3 310 aa9.94□□□□□ -0.82
SF3B3-204ENST00000563739 GPN3Q9UHW5 284 aaPredicted RBP9.94□□□□□ -0.82
SF3B3-204ENST00000563739 COLEC10Q9Y6Z7 277 aa9.94□□□□□ -0.82
SF3B3-204ENST00000563739 TRGV8A0A0C4DH27 118 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 A0A0J9YY10 115 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 A0A1B0GTH6 734 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 C17orf113A0A1B0GUU1 675 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 MYO1FO00160 1098 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 CCL21O00585 134 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 KLHL41O60662 606 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 UNC5CO95185 931 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 F10P00742 488 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 EPOP01588 193 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 COX6A1P12074 109 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 MAGP20916 626 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 ADRA1AP35348 466 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 SNRPNP63162 240 aaKnown RBP9.93□□□□□ -0.82
SF3B3-204ENST00000563739 GTF3C1Q12789 2109 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 GRB7Q14451 532 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 TUBB8Q3ZCM7 444 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 ZDHHC20Q5W0Z9 365 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 FCRL6Q6DN72 434 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 SARM1Q6SZW1 724 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 LUZP1Q86V48 1076 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 VSIG1Q86XK7 387 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 SHISA5Q8N114 240 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 MMP21Q8N119 569 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 ZNF567Q8N184 647 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 LINC01555Q8NAE3 123 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 OR4K2Q8NGD2 314 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 OR1N1Q8NGS0 311 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 C8orf44Q96CB5 159 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 C14orf79Q96F83 325 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 FCRL5Q96RD9 977 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 SRPK1Q96SB4 655 aaKnown RBP9.93□□□□□ -0.82
SF3B3-204ENST00000563739 CCM2Q9BSQ5 444 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 SLC7A5P2Q9GIP4 190 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 FAM96AQ9H5X1 160 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 MVB12BQ9H7P6 319 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 CHST11Q9NPF2 352 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 HAUS2Q9NVX0 235 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 EURLQ9NYK6 297 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 HACD3Q9P035 362 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 ABI3Q9P2A4 366 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 TINAGQ9UJW2 476 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 CDC23Q9UJX2 597 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 PLAGL1Q9UM63 463 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 MRPS2Q9Y399 296 aaKnown RBP9.93□□□□□ -0.82
SF3B3-204ENST00000563739 HEBP2Q9Y5Z4 205 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 PRSS21Q9Y6M0 314 aa9.93□□□□□ -0.82
SF3B3-204ENST00000563739 AKAP6Q13023 2319 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 A0A1B0GX78 115 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 LRRD1A4D1F6 860 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 KLHL33A6NCF5 533 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 ZNHIT1O43257 154 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 AGTP01019 485 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 ALBP02768 609 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 CD151P48509 253 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 PDK1Q15118 436 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 INAQ16352 499 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 FIGNQ5HY92 759 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 ATG9BQ674R7 924 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 DENND5AQ6IQ26 1287 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 TLDC1Q6P9B6 456 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 MFSD7Q6UXD7 560 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 GFRALQ6UXV0 394 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 RPTNQ6XPR3 784 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 TTLL10Q6ZVT0 673 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 PIANPQ8IYJ0 282 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 METTL27Q8N6F8 245 aaPredicted RBP9.92□□□□□ -0.82
SF3B3-204ENST00000563739 IPMKQ8NFU5 416 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 BRIX1Q8TDN6 353 aaKnown RBP9.92□□□□□ -0.82
SF3B3-204ENST00000563739 ZNF830Q96NB3 372 aaPredicted RBP9.92□□□□□ -0.82
SF3B3-204ENST00000563739 LMF1Q96S06 567 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 NDC1Q9BTX1 674 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 FICDQ9BVA6 458 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 TMUB1Q9BVT8 246 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 ENKD1Q9H0I2 346 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 TSPY26PQ9H489 355 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 EPS8L2Q9H6S3 715 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 ASB8Q9H765 288 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 ZNF160Q9HCG1 818 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms