RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 OR2A14Q96R47 310 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 CD180Q99467 661 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 OLFM1Q99784 485 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 PITPNM3Q9BZ71 974 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 B3GNT4Q9C0J1 378 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 ZMYND15Q9H091 742 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 L2HGDHQ9H9P8 463 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 LRRC4CQ9HCJ2 640 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 APMAPQ9HDC9 416 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 PPANQ9NQ55 473 aaKnown RBP8.28□□□□□ -1.08
UBR1-204ENST00000563239 FBXO8Q9NRD0 319 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 THSD1Q9NS62 852 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 POLG2Q9UHN1 485 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 TSR3Q9UJK0 312 aaKnown RBP8.28□□□□□ -1.08
UBR1-204ENST00000563239 ACSL6Q9UKU0 697 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 PCDHGA3Q9Y5H0 932 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 ACACAQ13085 2346 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 TLCD2A6NGC4 264 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 FAM159BA6NKW6 160 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 E5RI56 91 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 GFYI3L273 518 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 RASGRF2O14827 1237 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 PRICKLE3O43900 615 aaPredicted RBP8.27□□□□□ -1.09
UBR1-204ENST00000563239 PSIP1O75475 530 aaKnown RBP8.27□□□□□ -1.09
UBR1-204ENST00000563239 RASSF9O75901 435 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 TSPAN12O95859 305 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 CHRM5P08912 532 aaPredicted RBP8.27□□□□□ -1.09
UBR1-204ENST00000563239 MPC1LP0DKB6 136 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 FOLR1P15328 257 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 UGT2B7P16662 529 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 FDXRP22570 491 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 MCM3P25205 808 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 PRDX3P30048 256 aaKnown RBP8.27□□□□□ -1.09
UBR1-204ENST00000563239 SHMT2P34897 504 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 KCNAB1Q14722 419 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 DNTTIP2Q5QJE6 756 aaKnown RBP8.27□□□□□ -1.09
UBR1-204ENST00000563239 HECTD2Q5U5R9 776 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 ANKS6Q68DC2 871 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 PAQR3Q6TCH7 311 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 TMEM207Q6UWW9 146 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 C3orf62Q6ZUJ4 267 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 NEK10Q6ZWH5 1172 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 PIWIL4Q7Z3Z4 852 aaKnown RBP8.27□□□□□ -1.09
UBR1-204ENST00000563239 STRA8Q7Z7C7 330 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 SLC26A11Q86WA9 606 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 ZC3HC1Q86WB0 502 aaKnown RBP8.27□□□□□ -1.09
UBR1-204ENST00000563239 CCDC25Q86WR0 208 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 ZFAND4Q86XD8 727 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 FAM129CQ86XR2 697 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 DTX1Q86Y01 620 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 PALM2Q8IXS6 379 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 CPNE9Q8IYJ1 553 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 D2HGDHQ8N465 521 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 CEP112Q8N8E3 955 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 ASB11Q8WXH4 323 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 UBXN4Q92575 508 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 DLG3Q92796 817 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 TAAR9Q96RI9 348 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 CTRCQ99895 268 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 DDA1Q9BW61 102 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 FAM114A2Q9NRY5 505 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 SLC39A1Q9NY26 324 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 ACTR10Q9NZ32 417 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 OR6C2Q9NZP2 312 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 AKAP7Q9P0M2 348 aaPredicted RBP8.27□□□□□ -1.09
UBR1-204ENST00000563239 VWA7Q9Y334 891 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 B3GALT1Q9Y5Z6 326 aa8.27□□□□□ -1.09
UBR1-204ENST00000563239 LOC400499M0QZD8 3231 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 MGAQ8IWI9 3026 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 A0A1W2PPV9 198 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 PIPSLA2A3N6 862 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 GSAPA4D1B5 854 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 SLC9B1P1A6NJY1 282 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 C2orf74A8MZ97 194 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.26□□□□□ -1.09
UBR1-204ENST00000563239 MYO1CO00159 1063 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 MATN2O00339 956 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 HCRTR1O43613 425 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 VPS26AO75436 327 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 WISP3O95389 354 aaPredicted RBP8.26□□□□□ -1.09
UBR1-204ENST00000563239 ZIC2O95409 532 aaPredicted RBP8.26□□□□□ -1.09
UBR1-204ENST00000563239 RPN2P04844 631 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 GSTA2P09210 222 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 EBLN1P0CF75 366 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 CBSLP0DN79 551 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 ERGP11308 486 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 PVRP15151 417 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 ST6GAL1P15907 406 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 ITPKBP27987 946 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 CBSP35520 551 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 SKIV2L2P42285 1042 aaKnown RBP8.26□□□□□ -1.09
UBR1-204ENST00000563239 RAB28P51157 221 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 PCBP4P57723 403 aaKnown RBP8.26□□□□□ -1.09
UBR1-204ENST00000563239 TAS2R39P59534 338 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 CLN3Q13286 438 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 TGIF1Q15583 401 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 ZIC1Q15915 447 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 CYP2A13Q16696 494 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 TTLL9Q3SXZ7 439 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 ARMC6Q6NXE6 501 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms