RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 S100A3P33764 101 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 PIGAP37287 484 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 MAGEA2P43356 314 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 CXCR4P61073 352 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 HMGCS1Q01581 520 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 KCNC4Q03721 635 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 ZNF846Q147U1 533 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 PTPRRQ15256 657 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 CTU2Q2VPK5 515 aaKnown RBP12.79□□□□□ -0.36
USB1-207ENST00000563149 GGTA1PQ4G0N0 100 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 GRAMD4Q6IC98 578 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 SHQ1Q6PI26 577 aaKnown RBP12.79□□□□□ -0.36
USB1-207ENST00000563149 CRTC3Q6UUV7 619 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 SUSD1Q6UWL2 747 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 FAM151BQ6UXP7 276 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 PGBD3Q8N328 593 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 TCAIMQ8N3R3 496 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 DCAF4L2Q8NA75 395 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 LKAAEAR1Q8TD35 194 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 NUDT8Q8WV74 236 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 NCLNQ969V3 563 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 TESCQ96BS2 214 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 REXO5Q96IC2 774 aaKnown RBP12.79□□□□□ -0.36
USB1-207ENST00000563149 ZNF347Q96SE7 839 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 CSF3RQ99062 836 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 FUNDC2Q9BWH2 189 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 SLC32A1Q9H598 525 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 KCTD5Q9NXV2 234 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 MTRRQ9UBK8 725 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 SAMD4AQ9UPU9 718 aaKnown RBP12.79□□□□□ -0.36
USB1-207ENST00000563149 COQ6Q9Y2Z9 468 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 TMED5Q9Y3A6 229 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 PCDHB14Q9Y5E9 798 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 OR51B4Q9Y5P0 310 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 BACE2Q9Y5Z0 518 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 PRSS21Q9Y6M0 314 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 ZNF106Q9H2Y7 1883 aaKnown RBP12.79□□□□□ -0.36
USB1-207ENST00000563149 ZNF99A8MXY4 864 aaPredicted RBP12.79□□□□□ -0.36
USB1-207ENST00000563149 ZSCAN9O15535 394 aaPredicted RBP12.79□□□□□ -0.36
USB1-207ENST00000563149 SOCS5O75159 536 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 SULT1C4O75897 302 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 CCNDBP1O95273 360 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 SERPINA1P01009 418 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 HTR1AP08908 422 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 PORP16435 677 aaPredicted RBP12.79□□□□□ -0.36
USB1-207ENST00000563149 HOXB9P17482 250 aaPredicted RBP12.79□□□□□ -0.36
USB1-207ENST00000563149 ITGB6P18564 788 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 MZF1P28698 734 aaPredicted RBP12.79□□□□□ -0.36
USB1-207ENST00000563149 GGT5P36269 586 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 IST1P53990 364 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 OCA2Q04671 838 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 BCL2L1Q07817 233 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 VAC14Q08AM6 782 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 SFSWAPQ12872 951 aaKnown RBP12.79□□□□□ -0.36
USB1-207ENST00000563149 KEAP1Q14145 624 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 NR1D2Q14995 579 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 PHKG1Q16816 387 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 NIPAL1Q6NVV3 410 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 PRSS55Q6UWB4 352 aaPredicted RBP12.79□□□□□ -0.36
USB1-207ENST00000563149 GCNT7Q6ZNI0 430 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 LRRC8DQ7L1W4 858 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 CENPSQ8N2Z9 138 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 SLC15A4Q8N697 577 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 HJURPQ8NCD3 748 aaPredicted RBP12.79□□□□□ -0.36
USB1-207ENST00000563149 PIK3C3Q8NEB9 887 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 MAGEB10Q96LZ2 347 aaPredicted RBP12.79□□□□□ -0.36
USB1-207ENST00000563149 TBCDQ9BTW9 1192 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 BOCQ9BWV1 1114 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 APOL5Q9BWW9 433 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 ZFP14Q9HCL3 533 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 FARSBQ9NSD9 589 aaKnown RBP12.79□□□□□ -0.36
USB1-207ENST00000563149 WARS2Q9UGM6 360 aaKnown RBP12.79□□□□□ -0.36
USB1-207ENST00000563149 TMEFF2Q9UIK5 374 aaPredicted RBP12.79□□□□□ -0.36
USB1-207ENST00000563149 CRLS1Q9UJA2 301 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 LRFN2Q9ULH4 789 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 TDRKHQ9Y2W6 561 aaKnown RBP12.79□□□□□ -0.36
USB1-207ENST00000563149 GLYATL1P3A0A0U1RQE8 302 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 AGAP14A8MT82 685 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 GPR39O43194 453 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 TBL1XO60907 577 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 NDUFS2O75306 463 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 BCAS1O75363 584 aaPredicted RBP12.78□□□□□ -0.36
USB1-207ENST00000563149 ALPIP09923 528 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 PRKAR2AP13861 404 aaKnown RBP12.78□□□□□ -0.36
USB1-207ENST00000563149 JUNDP17535 347 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 SPAM1P38567 509 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 GDF5P43026 501 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 ARHGDIAP52565 204 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 CDK5R2Q13319 367 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 CDKN3Q16667 212 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 RGS21Q2M5E4 152 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 SLC44A4Q53GD3 710 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 LAIR2Q6ISS4 152 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 GALNT18Q6P9A2 607 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 TAS1R1Q7RTX1 841 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 LRRC70Q7Z2Q7 622 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 RBM23Q86U06 439 aaKnown RBP12.78□□□□□ -0.36
USB1-207ENST00000563149 METTL3Q86U44 580 aaKnown RBP12.78□□□□□ -0.36
USB1-207ENST00000563149 NPAS4Q8IUM7 802 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 PARP8Q8N3A8 854 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms