RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 MAP9Q49MG5 647 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 SNAP47Q5SQN1 464 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 EMBQ6PCB8 327 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 ADGRD1Q6QNK2 874 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 FAM92BQ6ZTR7 304 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 UBE2R2Q712K3 238 aaPredicted RBP9.49□□□□□ -0.89
CLK3-208ENST00000562626 TMPRSS7Q7RTY8 843 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 TRIM73Q86UV7 250 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 DCUN1D3Q8IWE4 304 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 LRRC56Q8IYG6 542 aaPredicted RBP9.49□□□□□ -0.89
CLK3-208ENST00000562626 DCBLD1Q8N8Z6 715 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 PPFIBP2Q8ND30 876 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 OR10G6Q8NH81 332 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 LCN9Q8WX39 176 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.49□□□□□ -0.89
CLK3-208ENST00000562626 NCSTNQ92542 709 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 PMEPA1Q969W9 287 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 ISL2Q96A47 359 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 SH3KBP1Q96B97 665 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 UBXN10Q96LJ8 280 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 CCDC74BQ96LY2 380 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 TGM7Q96PF1 710 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 PKP4Q99569 1192 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.49□□□□□ -0.89
CLK3-208ENST00000562626 TFB2MQ9H5Q4 396 aaKnown RBP9.49□□□□□ -0.89
CLK3-208ENST00000562626 STN1Q9H668 368 aaKnown RBP9.49□□□□□ -0.89
CLK3-208ENST00000562626 GPAMQ9HCL2 828 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 ZNF358Q9NW07 568 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 TXNDC16Q9P2K2 825 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 KLHL3Q9UH77 587 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 PDE10AQ9Y233 779 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 HEBP2Q9Y5Z4 205 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 COLEC10Q9Y6Z7 277 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 MN1Q10571 1320 aaPredicted RBP9.49□□□□□ -0.89
CLK3-208ENST00000562626 FRYQ5TBA9 3013 aa9.49□□□□□ -0.89
CLK3-208ENST00000562626 A0A1W2PPV9 198 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 SMIM23A6NLE4 172 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 MYO1CO00159 1063 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 EIF3FO00303 357 aaPredicted RBP9.48□□□□□ -0.89
CLK3-208ENST00000562626 RASGRF2O14827 1237 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 CAPN5O15484 640 aaPredicted RBP9.48□□□□□ -0.89
CLK3-208ENST00000562626 CTIFO43310 598 aaKnown RBP9.48□□□□□ -0.89
CLK3-208ENST00000562626 DUX1O43812 170 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 PRICKLE3O43900 615 aaPredicted RBP9.48□□□□□ -0.89
CLK3-208ENST00000562626 NRP2O60462 931 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 RFPL1O75677 317 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 C9P02748 559 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 C2P06681 752 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 INHBAP08476 426 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 ADRB1P08588 477 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 CHRM5P08912 532 aaPredicted RBP9.48□□□□□ -0.89
CLK3-208ENST00000562626 CCDC166P0CW27 439 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 CBSLP0DN79 551 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 THRAP10827 490 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 ERGP11308 486 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 ENO3P13929 434 aaPredicted RBP9.48□□□□□ -0.89
CLK3-208ENST00000562626 HGFP14210 728 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 PVRP15151 417 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 STMN1P16949 149 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 AMD1P17707 334 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 NDUFS1P28331 727 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 CBSP35520 551 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 SKIV2L2P42285 1042 aaKnown RBP9.48□□□□□ -0.89
CLK3-208ENST00000562626 IL2P60568 153 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 GPLD1P80108 840 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 CAMK2BQ13554 666 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 CSHL1Q14406 222 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 KRT33BQ14525 404 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 TSNQ15631 228 aaKnown RBP9.48□□□□□ -0.89
CLK3-208ENST00000562626 C18orf21Q32NC0 220 aaPredicted RBP9.48□□□□□ -0.89
CLK3-208ENST00000562626 UGT3A1Q6NUS8 523 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 IRGCQ6NXR0 463 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 RBM44Q6ZP01 1051 aaKnown RBP9.48□□□□□ -0.89
CLK3-208ENST00000562626 AMIGO1Q86WK6 493 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 RBM12BQ8IXT5 1001 aaKnown RBP9.48□□□□□ -0.89
CLK3-208ENST00000562626 MREGQ8N565 214 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 AVL9Q8NBF6 648 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 ZNF480Q8WV37 535 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 KCTD4Q8WVF5 259 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 ZFPM2Q8WW38 1151 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 NXNL1Q96CM4 212 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 RNF31Q96EP0 1072 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 PDLIM5Q96HC4 596 aaKnown RBP9.48□□□□□ -0.89
CLK3-208ENST00000562626 GPR78Q96P69 363 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 SCNM1Q9BWG6 230 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 KLHL25Q9H0H3 589 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 POPDC3Q9HBV1 291 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 HRASLS2Q9NWW9 162 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 PDP2Q9P2J9 529 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 TBK1Q9UHD2 729 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 ZNF180Q9UJW8 692 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 CLCA2Q9UQC9 943 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 SH2B3Q9UQQ2 575 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 KLHL20Q9Y2M5 609 aa9.48□□□□□ -0.89
CLK3-208ENST00000562626 A0A096LPK6 155 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 IGHV5-51A0A0C4DH38 117 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 A0A1W2PPM1 405 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 HCRTR1O43613 425 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 TCEA3O75764 348 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 ZIC2O95409 532 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms