RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 DEFB110Q30KQ9 67 aa9.86□□□□□ -0.83
APH1B-208ENST00000560353 LDLRAP1Q5SW96 308 aa9.86□□□□□ -0.83
APH1B-208ENST00000560353 FNBP1LQ5T0N5 605 aa9.86□□□□□ -0.83
APH1B-208ENST00000560353 TIGD7Q6NT04 549 aaPredicted RBP9.86□□□□□ -0.83
APH1B-208ENST00000560353 SPESP1Q6UW49 350 aa9.86□□□□□ -0.83
APH1B-208ENST00000560353 SHISA6Q6ZSJ9 500 aa9.86□□□□□ -0.83
APH1B-208ENST00000560353 NDUFAF7Q7L592 441 aa9.86□□□□□ -0.83
APH1B-208ENST00000560353 SIRT6Q8N6T7 355 aa9.86□□□□□ -0.83
APH1B-208ENST00000560353 LILRB4Q8NHJ6 448 aa9.86□□□□□ -0.83
APH1B-208ENST00000560353 FATE1Q969F0 183 aa9.86□□□□□ -0.83
APH1B-208ENST00000560353 RMND5BQ96G75 393 aaPredicted RBP9.86□□□□□ -0.83
APH1B-208ENST00000560353 CSPG4P5Q96PW8 444 aa9.86□□□□□ -0.83
APH1B-208ENST00000560353 SRPK1Q96SB4 655 aaKnown RBP9.86□□□□□ -0.83
APH1B-208ENST00000560353 CCM2Q9BSQ5 444 aa9.86□□□□□ -0.83
APH1B-208ENST00000560353 POLDIP3Q9BY77 421 aaKnown RBP9.86□□□□□ -0.83
APH1B-208ENST00000560353 TFB2MQ9H5Q4 396 aaKnown RBP9.86□□□□□ -0.83
APH1B-208ENST00000560353 SOX17Q9H6I2 414 aaPredicted RBP9.86□□□□□ -0.83
APH1B-208ENST00000560353 CBX8Q9HC52 389 aa9.86□□□□□ -0.83
APH1B-208ENST00000560353 PARVAQ9NVD7 372 aa9.86□□□□□ -0.83
APH1B-208ENST00000560353 ACTR10Q9NZ32 417 aa9.86□□□□□ -0.83
APH1B-208ENST00000560353 AKAP6Q13023 2319 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 NSG1A0A0A6YYJ2 146 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 OR2AG2A6NM03 316 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 CTAG2O75638 210 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 TOXO94900 526 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 MT-CYBP00156 380 aaPredicted RBP9.85□□□□□ -0.83
APH1B-208ENST00000560353 CTSBP07858 339 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 PIRTP0C851 137 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 CHRNB4P30926 498 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 CD86P42081 329 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 NSG1P42857 185 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 ALDH6A1Q02252 535 aaKnown RBP9.85□□□□□ -0.83
APH1B-208ENST00000560353 TFF3Q07654 80 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 MAMLD1Q13495 774 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 OLIG2Q13516 323 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 ZIC1Q15915 447 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 DPYSL2Q16555 572 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 LONRF2Q1L5Z9 754 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 HIBCHQ6NVY1 386 aaPredicted RBP9.85□□□□□ -0.83
APH1B-208ENST00000560353 C3P1Q6ZMU1 363 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 RIPOR1Q6ZS17 1223 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 TTLL10Q6ZVT0 673 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 AMIGO1Q86WK6 493 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 CLYBLQ8N0X4 340 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 ACRBPQ8NEB7 543 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 OR2L2Q8NH16 312 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 DTX3LQ8TDB6 740 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 RMDN2Q96LZ7 410 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 FERD3LQ96RJ6 166 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 CRB3Q9BUF7 120 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 LIME1Q9H400 295 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 CLSTN2Q9H4D0 955 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 PLCL2Q9UPR0 1127 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 PLEKHA6Q9Y2H5 1048 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 ZDHHC9Q9Y397 364 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 ZNF711Q9Y462 761 aa9.85□□□□□ -0.83
APH1B-208ENST00000560353 TMEM191CA6NGB0 347 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 VSTM2BA6NLU5 285 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 NPIPA5E9PKD4 350 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 PES1O00541 588 aaKnown RBP9.84□□□□□ -0.83
APH1B-208ENST00000560353 TTI1O43156 1089 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 ASNA1O43681 348 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 HLA-DQB2P05538 268 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 POLBP06746 335 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 MMP2P08253 660 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 CCNCP24863 283 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 SPAM1P38567 509 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 RAB28P51157 221 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 AP2B1P63010 937 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 GALNT2Q10471 571 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 TPD52L1Q16890 204 aaPredicted RBP9.84□□□□□ -0.83
APH1B-208ENST00000560353 BOLA3Q53S33 107 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 TFDP3Q5H9I0 405 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 ZNF766Q5HY98 468 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 ABHD17BQ5VST6 288 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 ZDHHC20Q5W0Z9 365 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 ATG9BQ674R7 924 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 TXNRD3NBQ6F5E7 133 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 SARM1Q6SZW1 724 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 ADGRF3Q8IZF5 1079 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 MCOLN2Q8IZK6 566 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 DNAJC22Q8N4W6 341 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 DDHD1Q8NEL9 900 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 WFDC11Q8NEX6 87 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 RBM41Q96IZ5 413 aaKnown RBP9.84□□□□□ -0.83
APH1B-208ENST00000560353 TSGA13Q96PP4 275 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 TRIB3Q96RU7 358 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 IL26Q9NPH9 171 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 SAMSN1Q9NSI8 373 aaKnown RBP9.84□□□□□ -0.83
APH1B-208ENST00000560353 ZNF358Q9NW07 568 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.84□□□□□ -0.83
APH1B-208ENST00000560353 IL1RAPL1Q9NZN1 696 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 CTSFQ9UBX1 484 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 TEKT2Q9UIF3 430 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 MKL2Q9ULH7 1088 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 NPIPA1Q9UND3 350 aa9.84□□□□□ -0.83
APH1B-208ENST00000560353 LUC7L2Q9Y383 392 aaKnown RBP9.84□□□□□ -0.83
APH1B-208ENST00000560353 HRNRQ86YZ3 2850 aaPredicted RBP9.84□□□□□ -0.83
APH1B-208ENST00000560353 FAM237BA0A1B0GVD1 139 aa9.83□□□□□ -0.84
APH1B-208ENST00000560353 NKX2-6A6NCS4 301 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms