RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 RIOK2Q9BVS4 552 aaKnown RBP17.37■□□□□ 0.37
SNX1-208ENST00000559844 SLC12A9Q9BXP2 914 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 BRINP2Q9C0B6 783 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 VCX3BQ9H321 246 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 FBXL12Q9NXK8 326 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 SUCOQ9UBS9 1254 aaKnown RBP17.37■□□□□ 0.37
SNX1-208ENST00000559844 SCML1Q9UN30 329 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 PLXNA2O75051 1894 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 K7ESF4 209 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 LAMTOR5O43504 91 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 KATNA1O75449 491 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 RNASEH2AO75792 299 aaKnown RBP17.37■□□□□ 0.37
SNX1-208ENST00000559844 BCAS2O75934 225 aaPredicted RBP17.37■□□□□ 0.37
SNX1-208ENST00000559844 WDR47O94967 919 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 HIST1H2AGP0C0S8 130 aaPredicted RBP17.37■□□□□ 0.37
SNX1-208ENST00000559844 ELFN1P0C7U0 828 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 EPB42P16452 691 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 XRCC1P18887 633 aaPredicted RBP17.37■□□□□ 0.37
SNX1-208ENST00000559844 HIST1H2ADP20671 130 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 ATP6V1C1P21283 382 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 DRD3P35462 400 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 RPIAP49247 311 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 CNTN1Q12860 1018 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 ZFP1Q6P2D0 407 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 FBXL19Q6PCT2 694 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 IL27RAQ6UWB1 636 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 ERN2Q76MJ5 926 aaKnown RBP17.37■□□□□ 0.37
SNX1-208ENST00000559844 C1orf210Q8IVY1 113 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 HDDC3Q8N4P3 179 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 DTWD2Q8NBA8 298 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 HIPK4Q8NE63 616 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 HIST1H2AHQ96KK5 128 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 HIST1H2AJQ99878 128 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 HOPXQ9BPY8 73 aaPredicted RBP17.37■□□□□ 0.37
SNX1-208ENST00000559844 H2AFJQ9BTM1 129 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 NTMT1Q9BV86 223 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 TPSD1Q9BZJ3 242 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 PARVBQ9HBI1 364 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 CD93Q9NPY3 652 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 GID8Q9NWU2 228 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 SERGEFQ9UGK8 458 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 TRPS1Q9UHF7 1281 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 PACSIN3Q9UKS6 424 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 CUL9Q8IWT3 2517 aa17.37■□□□□ 0.37
SNX1-208ENST00000559844 E7ENX8 843 aa17.36■□□□□ 0.37
SNX1-208ENST00000559844 H0Y858 1186 aa17.36■□□□□ 0.37
SNX1-208ENST00000559844 STK16O75716 305 aa17.36■□□□□ 0.37
SNX1-208ENST00000559844 EBLN1P0CF75 366 aa17.36■□□□□ 0.37
SNX1-208ENST00000559844 C7P10643 843 aa17.36■□□□□ 0.37
SNX1-208ENST00000559844 AVPR2P30518 371 aa17.36■□□□□ 0.37
SNX1-208ENST00000559844 P2RY2P41231 377 aa17.36■□□□□ 0.37
SNX1-208ENST00000559844 KCNK10P57789 538 aa17.36■□□□□ 0.37
SNX1-208ENST00000559844 HSPA14Q0VDF9 509 aa17.36■□□□□ 0.37
SNX1-208ENST00000559844 BLOC1S3Q6QNY0 202 aa17.36■□□□□ 0.37
SNX1-208ENST00000559844 TSSK4Q6SA08 328 aa17.36■□□□□ 0.37
SNX1-208ENST00000559844 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.36■□□□□ 0.37
SNX1-208ENST00000559844 LIPIQ6XZB0 460 aa17.36■□□□□ 0.37
SNX1-208ENST00000559844 SNX31Q8N9S9 440 aa17.36■□□□□ 0.37
SNX1-208ENST00000559844 OR2T11Q8NH01 316 aa17.36■□□□□ 0.37
SNX1-208ENST00000559844 BTN2A2Q8WVV5 523 aa17.36■□□□□ 0.37
SNX1-208ENST00000559844 ASB9Q96DX5 294 aa17.36■□□□□ 0.37
SNX1-208ENST00000559844 PRMT8Q9NR22 394 aaPredicted RBP17.36■□□□□ 0.37
SNX1-208ENST00000559844 ARL15Q9NXU5 204 aa17.36■□□□□ 0.37
SNX1-208ENST00000559844 ZIM2Q9NZV7 527 aa17.36■□□□□ 0.37
SNX1-208ENST00000559844 PDE10AQ9Y233 779 aa17.36■□□□□ 0.37
SNX1-208ENST00000559844 ADRB3P13945 408 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 CYP2A7P20853 494 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 GGT5P36269 586 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 HNMTP50135 292 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 TPMTP51580 245 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 DIO3P55073 304 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 NME5P56597 212 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 ACOX1Q15067 660 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 SAMD4BQ5PRF9 694 aaKnown RBP17.35■□□□□ 0.37
SNX1-208ENST00000559844 C6orf136Q5SQH8 315 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 SCIMPQ6UWF3 145 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 Q6ZSR9 355 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 LRRC70Q7Z2Q7 622 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 FNDC5Q8NAU1 212 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 ASZ1Q8WWH4 475 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 HDAC8Q9BY41 377 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 SLC32A1Q9H598 525 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 EBF1Q9UH73 591 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 LRRK1Q38SD2 2015 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 SLC28A1O00337 649 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 WNT9AO14904 365 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 EMX2Q04743 252 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 FOXM1Q08050 763 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 ELP6Q0PNE2 266 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 TRAP1Q12931 704 aaKnown RBP17.35■□□□□ 0.37
SNX1-208ENST00000559844 BOP1Q14137 746 aaKnown RBP17.35■□□□□ 0.37
SNX1-208ENST00000559844 SMU1Q2TAY7 513 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 PIP5KL1Q5T9C9 394 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 AGBL4Q5VU57 503 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 USP30Q70CQ3 517 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 FAM124AQ86V42 546 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 DCBLD1Q8N8Z6 715 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 ASB11Q8WXH4 323 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 ELMO1Q92556 727 aa17.35■□□□□ 0.37
SNX1-208ENST00000559844 PPP3R2Q96LZ3 170 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms