RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 RASGRP3Q8IV61 690 aa8.09□□□□□ -1.11
PSEN1-223ENST00000557511 DCUN1D3Q8IWE4 304 aa8.09□□□□□ -1.11
PSEN1-223ENST00000557511 DENND6AQ8IWF6 608 aa8.09□□□□□ -1.11
PSEN1-223ENST00000557511 FBXO36Q8NEA4 188 aa8.09□□□□□ -1.11
PSEN1-223ENST00000557511 OR5AR1Q8NGP9 310 aa8.09□□□□□ -1.11
PSEN1-223ENST00000557511 KCNJ9Q92806 393 aa8.09□□□□□ -1.11
PSEN1-223ENST00000557511 RAD51AP1Q96B01 352 aa8.09□□□□□ -1.11
PSEN1-223ENST00000557511 SLC22A18Q96BI1 424 aa8.09□□□□□ -1.11
PSEN1-223ENST00000557511 DDA1Q9BW61 102 aa8.09□□□□□ -1.11
PSEN1-223ENST00000557511 TSPYL1Q9H0U9 437 aa8.09□□□□□ -1.11
PSEN1-223ENST00000557511 ZNF768Q9H5H4 540 aaKnown RBP8.09□□□□□ -1.11
PSEN1-223ENST00000557511 SAYSD1Q9NPB0 183 aa8.09□□□□□ -1.11
PSEN1-223ENST00000557511 ASCL3Q9NQ33 180 aa8.09□□□□□ -1.11
PSEN1-223ENST00000557511 FBXO8Q9NRD0 319 aa8.09□□□□□ -1.11
PSEN1-223ENST00000557511 LATS2Q9NRM7 1088 aa8.09□□□□□ -1.11
PSEN1-223ENST00000557511 TAS2R13Q9NYV9 303 aa8.09□□□□□ -1.11
PSEN1-223ENST00000557511 IL1RAPL1Q9NZN1 696 aa8.09□□□□□ -1.11
PSEN1-223ENST00000557511 OR6C2Q9NZP2 312 aa8.09□□□□□ -1.11
PSEN1-223ENST00000557511 MTRF1LQ9UGC7 380 aaKnown RBP8.09□□□□□ -1.11
PSEN1-223ENST00000557511 LNPEPQ9UIQ6 1025 aa8.09□□□□□ -1.11
PSEN1-223ENST00000557511 TRMT6Q9UJA5 497 aaKnown RBP8.09□□□□□ -1.11
PSEN1-223ENST00000557511 ZNF106Q9H2Y7 1883 aaKnown RBP8.09□□□□□ -1.12
PSEN1-223ENST00000557511 CDRT15L2A8MXV6 281 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 ISM1B1AKI9 464 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 FANCGO15287 622 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 ZBTB14O43829 449 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 PRAMEF10O60809 474 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 NIPSNAP2O75323 286 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 SLCO2B1O94956 709 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 CBSLP0DN79 551 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 ERVK-10P10266 1014 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 LIPCP11150 499 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 FGF3P11487 239 aaPredicted RBP8.08□□□□□ -1.12
PSEN1-223ENST00000557511 ENO3P13929 434 aaPredicted RBP8.08□□□□□ -1.12
PSEN1-223ENST00000557511 ACADLP28330 430 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 ATP5DP30049 168 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 CBSP35520 551 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 LEPRP48357 1165 aaKnown RBP8.08□□□□□ -1.12
PSEN1-223ENST00000557511 RAB28P51157 221 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 SLC12A2P55011 1212 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 HSD11B2P80365 405 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 MRPS25P82663 173 aaKnown RBP8.08□□□□□ -1.12
PSEN1-223ENST00000557511 CFHR1Q03591 330 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 MGAT5Q09328 741 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 IL11RAQ14626 422 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 GLE1Q53GS7 698 aaKnown RBP8.08□□□□□ -1.12
PSEN1-223ENST00000557511 CTSL3PQ5NE16 218 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 DUPD1Q68J44 220 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 CNSTQ6PJW8 725 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 UNC5AQ6ZN44 842 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 MICALCLQ6ZW33 695 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 ZNF572Q7Z3I7 529 aaPredicted RBP8.08□□□□□ -1.12
PSEN1-223ENST00000557511 PPP1R3BQ86XI6 285 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 GPATCH11Q8N954 259 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 ZSCAN1Q8NBB4 408 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 LKAAEAR1Q8TD35 194 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 HNRNPLLQ8WVV9 542 aaKnown RBP8.08□□□□□ -1.12
PSEN1-223ENST00000557511 INPP5DQ92835 1189 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 KIAA1143Q96AT1 154 aaPredicted RBP8.08□□□□□ -1.12
PSEN1-223ENST00000557511 FAM136AQ96C01 138 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 VPS39Q96JC1 886 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 BIRC8Q96P09 236 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 MAP3K3Q99759 626 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 TRIM56Q9BRZ2 755 aaKnown RBP8.08□□□□□ -1.12
PSEN1-223ENST00000557511 GRIP2Q9C0E4 1043 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 SLC7A5P2Q9GIP4 190 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 XKR8Q9H6D3 395 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 SYTL2Q9HCH5 934 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 C1GALT1Q9NS00 363 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 INTS7Q9NVH2 962 aaKnown RBP8.08□□□□□ -1.12
PSEN1-223ENST00000557511 OCIAD1Q9NX40 245 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 OGFRQ9NZT2 677 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.08□□□□□ -1.12
PSEN1-223ENST00000557511 KLHL42Q9P2K6 505 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 RARRES3Q9UL19 164 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 CORO1CQ9ULV4 474 aaPredicted RBP8.08□□□□□ -1.12
PSEN1-223ENST00000557511 PCDHGA3Q9Y5H0 932 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 PTPRBP23467 1997 aa8.08□□□□□ -1.12
PSEN1-223ENST00000557511 A0A087WV48 116 aa8.07□□□□□ -1.12
PSEN1-223ENST00000557511 CDC14CA4D256 554 aa8.07□□□□□ -1.12
PSEN1-223ENST00000557511 SLC35F4A4IF30 521 aa8.07□□□□□ -1.12
PSEN1-223ENST00000557511 EIF3FO00303 357 aaPredicted RBP8.07□□□□□ -1.12
PSEN1-223ENST00000557511 BTN3A1O00481 513 aa8.07□□□□□ -1.12
PSEN1-223ENST00000557511 TLX3O43711 291 aaPredicted RBP8.07□□□□□ -1.12
PSEN1-223ENST00000557511 KIF1CO43896 1103 aaKnown RBP8.07□□□□□ -1.12
PSEN1-223ENST00000557511 BANF1O75531 89 aa8.07□□□□□ -1.12
PSEN1-223ENST00000557511 SPAG6O75602 509 aa8.07□□□□□ -1.12
PSEN1-223ENST00000557511 HAUS5O94927 633 aa8.07□□□□□ -1.12
PSEN1-223ENST00000557511 SYF2O95926 243 aaKnown RBP8.07□□□□□ -1.12
PSEN1-223ENST00000557511 MT-ND3P03897 115 aa8.07□□□□□ -1.12
PSEN1-223ENST00000557511 GSTA2P09210 222 aa8.07□□□□□ -1.12
PSEN1-223ENST00000557511 HIST1H2AGP0C0S8 130 aaPredicted RBP8.07□□□□□ -1.12
PSEN1-223ENST00000557511 NELFEP18615 380 aaKnown RBP8.07□□□□□ -1.12
PSEN1-223ENST00000557511 HIST1H2ADP20671 130 aa8.07□□□□□ -1.12
PSEN1-223ENST00000557511 CYP2A7P20853 494 aa8.07□□□□□ -1.12
PSEN1-223ENST00000557511 PRDX3P30048 256 aaKnown RBP8.07□□□□□ -1.12
PSEN1-223ENST00000557511 HSD17B2P37059 387 aa8.07□□□□□ -1.12
PSEN1-223ENST00000557511 ETV5P41161 510 aa8.07□□□□□ -1.12
PSEN1-223ENST00000557511 TMPRSS3P57727 454 aa8.07□□□□□ -1.12
PSEN1-223ENST00000557511 MPP1Q00013 466 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms