RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 SF3A3Q12874 501 aaKnown RBP eCLIP4.41□□□□□ -1.7
SRP54-212ENST00000556992 OVGP1Q12889 678 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 TP53BP2Q13625 1128 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 KRT72Q14CN4 511 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 TBCCQ15814 346 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 MYLK3Q32MK0 819 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 AARS2Q5JTZ9 985 aaKnown RBP4.41□□□□□ -1.7
SRP54-212ENST00000556992 ARMC12Q5T9G4 340 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 LYPLAL1Q5VWZ2 237 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 FAM45BPQ6NSW5 357 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 CNSTQ6PJW8 725 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 AFTPHQ6ULP2 937 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 LINGO4Q6UY18 593 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 CERS6Q6ZMG9 384 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 KANSL1Q7Z3B3 1105 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 CMC1Q7Z7K0 106 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 SYT12Q8IV01 421 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 SLC41A1Q8IVJ1 513 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 DENND6AQ8IWF6 608 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 BBS7Q8IWZ6 715 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 GPATCH11Q8N954 259 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 CPEB3Q8NE35 698 aaKnown RBP4.41□□□□□ -1.7
SRP54-212ENST00000556992 OR52K2Q8NGK3 314 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 OR6Y1Q8NGX8 325 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 RFWD2Q8NHY2 731 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 FAM45AQ8TCE6 357 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 SLC22A17Q8WUG5 538 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 PDCD6IPQ8WUM4 868 aaKnown RBP4.41□□□□□ -1.7
SRP54-212ENST00000556992 POF1BQ8WVV4 589 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 ATXN7L3BQ96GX2 97 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 CDKN2AIPNLQ96HQ2 116 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 NSL1Q96IY1 281 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 CNDP1Q96KN2 507 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 UBXN10Q96LJ8 280 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 TBATAQ96M53 351 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 ZNF641Q96N77 438 aaPredicted RBP4.41□□□□□ -1.7
SRP54-212ENST00000556992 RILPQ96NA2 401 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 TMEM237Q96Q45 408 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 RAB3IPQ96QF0 476 aaPredicted RBP4.41□□□□□ -1.7
SRP54-212ENST00000556992 C1QTNF1Q9BXJ1 281 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 TDRD1Q9BXT4 1180 aaKnown RBP4.41□□□□□ -1.7
SRP54-212ENST00000556992 MRPL46Q9H2W6 279 aaKnown RBP4.41□□□□□ -1.7
SRP54-212ENST00000556992 ATP13A3Q9H7F0 1226 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 ECT2Q9H8V3 914 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 KCNK13Q9HB14 408 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 EML4Q9HC35 981 aaKnown RBP4.41□□□□□ -1.7
SRP54-212ENST00000556992 SYTL2Q9HCH5 934 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 ABCF3Q9NUQ8 709 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 IL1RAPL1Q9NZN1 696 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 SLC17A6Q9P2U8 582 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 VPS51Q9UID3 782 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 PKP3Q9Y446 797 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 COMMD10Q9Y6G5 202 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 COX11Q9Y6N1 276 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 CAPN7Q9Y6W3 813 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 ZFHX4Q86UP3 3567 aa4.41□□□□□ -1.7
SRP54-212ENST00000556992 MYH10P35580 1976 aa4.4□□□□□ -1.7
SRP54-212ENST00000556992 SCN1AP35498 2009 aa4.4□□□□□ -1.7
SRP54-212ENST00000556992 CCDC195A0A1B0GUA6 201 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 TARM1B6A8C7 271 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 F8W8V4 182 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 PHGDHO43175 533 aaKnown RBP4.4□□□□□ -1.71
SRP54-212ENST00000556992 SOCS5O75159 536 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 UNC5CO95185 931 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 PGLSO95336 258 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 HSPA4LO95757 839 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 IGSF6O95976 241 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 MT-CO1P00395 513 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 GOT2P00505 430 aaKnown RBP4.4□□□□□ -1.71
SRP54-212ENST00000556992 CYP17A1P05093 508 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 PRKCGP05129 697 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 PYGLP06737 847 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 RHOP08100 348 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 PDHA1P08559 390 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 CCDC166P0CW27 439 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 TPBGLP0DKB5 382 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 FGF3P11487 239 aaPredicted RBP4.4□□□□□ -1.71
SRP54-212ENST00000556992 TFEBP19484 476 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 IMPDH1P20839 514 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 CD9P21926 228 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 NFKBIAP25963 317 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 SERPINA4P29622 427 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 SLC8A1P32418 973 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 HMGCLP35914 325 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 NNMTP40261 264 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 PTGER3P43115 390 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 ABCG1P45844 678 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 RGRP47804 291 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 RPL14P50914 215 aaKnown RBP4.4□□□□□ -1.71
SRP54-212ENST00000556992 ZNF140P52738 457 aaPredicted RBP4.4□□□□□ -1.71
SRP54-212ENST00000556992 STC1P52823 247 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 NAGLUP54802 743 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 ADARP55265 1226 aaKnown RBP4.4□□□□□ -1.71
SRP54-212ENST00000556992 ATP6V0D1P61421 351 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 ERVK-21P61565 698 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 NAA20P61599 178 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 SNRPD1P62314 119 aaKnown RBP4.4□□□□□ -1.71
SRP54-212ENST00000556992 ZXDBP98169 803 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 MPP1Q00013 466 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 ECT2LQ008S8 904 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms