RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 OR8K5Q8NH50 307 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 OR1L3Q8NH93 324 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 OR2A14Q96R47 310 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 LRRC1Q9BTT6 524 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 EFHD1Q9BUP0 239 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 TSSK1BQ9BXA7 367 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 TRIM31Q9BZY9 425 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 KLHL25Q9H0H3 589 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 LHX9Q9NQ69 397 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 IL1RAPL1Q9NZN1 696 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 POLG2Q9UHN1 485 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 ANAPC5Q9UJX4 755 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 TDRKHQ9Y2W6 561 aaKnown RBP9.99□□□□□ -0.81
SHMT2-224ENST00000556737 PCSK5Q92824 1860 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 HELZ2Q9BYK8 2649 aaKnown RBP9.98□□□□□ -0.81
SHMT2-224ENST00000556737 ZCWPW2A0A1B0GU75 182 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 FAM237BA0A1B0GVD1 139 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 F8W8V4 182 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 GOLGA8MH3BSY2 632 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 TTI1O43156 1089 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 RAD51CO43502 376 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 HCRTR1O43613 425 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 CPNE3O75131 537 aaKnown RBP9.98□□□□□ -0.81
SHMT2-224ENST00000556737 NIPSNAP2O75323 286 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 MT-ND3P03897 115 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 NTRK1P04629 796 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 APOA4P06727 396 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 FURINP09958 794 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 PLA2G2AP14555 144 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 OGNP20774 298 aaKnown RBP9.98□□□□□ -0.81
SHMT2-224ENST00000556737 RORAP35398 523 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 PPARGP37231 505 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-224ENST00000556737 ADARP55265 1226 aaKnown RBP9.98□□□□□ -0.81
SHMT2-224ENST00000556737 EIF3BP55884 814 aaKnown RBP9.98□□□□□ -0.81
SHMT2-224ENST00000556737 POLE2P56282 527 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 SLC7A5Q01650 507 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 DHX34Q14147 1143 aaKnown RBP9.98□□□□□ -0.81
SHMT2-224ENST00000556737 NAA30Q147X3 362 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-224ENST00000556737 TMED2Q15363 201 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 KYNUQ16719 465 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 GLE1Q53GS7 698 aaKnown RBP9.98□□□□□ -0.81
SHMT2-224ENST00000556737 TMTC4Q5T4D3 741 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 RNF187Q5TA31 235 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-224ENST00000556737 RNASEH2BQ5TBB1 312 aaKnown RBP9.98□□□□□ -0.81
SHMT2-224ENST00000556737 PTRHD1Q6GMV3 140 aaKnown RBP9.98□□□□□ -0.81
SHMT2-224ENST00000556737 MRNIPQ6NTE8 343 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 BORAQ6PGQ7 559 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 UNC5DQ6UXZ4 953 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 CENPUQ71F23 418 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 TMEM135Q86UB9 458 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 TMEM126BQ8IUX1 230 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 DCUN1D3Q8IWE4 304 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 C19orf47Q8N9M1 422 aaKnown RBP9.98□□□□□ -0.81
SHMT2-224ENST00000556737 LMNTD1Q8N9Z9 388 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 ASZ1Q8WWH4 475 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 SLCO2A1Q92959 643 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 ZNF669Q96BR6 464 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-224ENST00000556737 LRFN5Q96NI6 719 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 IL17FQ96PD4 163 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 TRIM51Q9BSJ1 452 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 RAB17Q9H0T7 212 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 XAB2Q9HCS7 855 aaKnown RBP9.98□□□□□ -0.81
SHMT2-224ENST00000556737 FAM60AQ9NP50 221 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 STARD5Q9NSY2 213 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 OR6C2Q9NZP2 312 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 ASIC3Q9UHC3 531 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 CIDEBQ9UHD4 219 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 RUVBL2Q9Y230 463 aaKnown RBP9.98□□□□□ -0.81
SHMT2-224ENST00000556737 UTP11Q9Y3A2 253 aaKnown RBP9.98□□□□□ -0.81
SHMT2-224ENST00000556737 PCDHB3Q9Y5E6 796 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 NFS1Q9Y697 457 aa9.98□□□□□ -0.81
SHMT2-224ENST00000556737 TENM4Q6N022 2769 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 A0A0J9YY10 115 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 KRT87PA6NCN2 255 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 FAM187AA6NFU0 413 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 C21orf140B9A014 251 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 TMEM150CB9EJG8 249 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 NDUFS3O75489 264 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 CTSBP07858 339 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 PTGIRP43119 386 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 BDKRB1P46663 353 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 RAB28P51157 221 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 RPS18P62269 152 aaKnown RBP9.97□□□□□ -0.81
SHMT2-224ENST00000556737 SARNPP82979 210 aaKnown RBP9.97□□□□□ -0.81
SHMT2-224ENST00000556737 GUCY2DQ02846 1103 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 PTK6Q13882 451 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 KIR2DS3Q14952 304 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 SLC5A12Q1EHB4 618 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 CCSMST1Q4G0I0 132 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 ANKRD20A4Q4UJ75 823 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 PLEKHS1Q5SXH7 462 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 ZNF385CQ66K41 422 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-224ENST00000556737 LCN10Q6JVE6 187 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 CASC4Q6P4E1 433 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 FAM199XQ6PEV8 388 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-224ENST00000556737 FAM198BQ6UWH4 519 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 CILP2Q8IUL8 1156 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 SPNS2Q8IVW8 549 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 OTUD6BQ8N6M0 293 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 DENND1AQ8TEH3 1009 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms