RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 DNAJC22Q8N4W6 341 aa11.44□□□□□ -0.58
ACTN1-221ENST00000556571 OR13C4Q8NGS5 318 aa11.44□□□□□ -0.58
ACTN1-221ENST00000556571 DLG3Q92796 817 aa11.44□□□□□ -0.58
ACTN1-221ENST00000556571 RELTQ969Z4 430 aa11.44□□□□□ -0.58
ACTN1-221ENST00000556571 FKBP10Q96AY3 582 aa11.44□□□□□ -0.58
ACTN1-221ENST00000556571 VPS50Q96JG6 964 aa11.44□□□□□ -0.58
ACTN1-221ENST00000556571 CNDP1Q96KN2 507 aa11.44□□□□□ -0.58
ACTN1-221ENST00000556571 QKIQ96PU8 341 aaKnown RBP eCLIP11.44□□□□□ -0.58
ACTN1-221ENST00000556571 SLX1AQ9BQ83 275 aa11.44□□□□□ -0.58
ACTN1-221ENST00000556571 LHPPQ9H008 270 aa11.44□□□□□ -0.58
ACTN1-221ENST00000556571 GBA3Q9H227 469 aa11.44□□□□□ -0.58
ACTN1-221ENST00000556571 FAM96AQ9H5X1 160 aa11.44□□□□□ -0.58
ACTN1-221ENST00000556571 MRM3Q9HC36 420 aaKnown RBP11.44□□□□□ -0.58
ACTN1-221ENST00000556571 SLC22A11Q9NSA0 550 aa11.44□□□□□ -0.58
ACTN1-221ENST00000556571 OR6C2Q9NZP2 312 aa11.44□□□□□ -0.58
ACTN1-221ENST00000556571 POLG2Q9UHN1 485 aa11.44□□□□□ -0.58
ACTN1-221ENST00000556571 CDC23Q9UJX2 597 aa11.44□□□□□ -0.58
ACTN1-221ENST00000556571 PKDREJQ9NTG1 2253 aa11.44□□□□□ -0.58
ACTN1-221ENST00000556571 CCDC88CQ9P219 2028 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 MTORP42345 2549 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 A0A1B0GX78 115 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 SOCS6O14544 535 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 SPOPO43791 374 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 AKR1B10O60218 316 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 ONECUT2O95948 504 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 ADRA1AP35348 466 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 ARSFP54793 590 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 TMPRSS15P98073 1019 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 OTUD4Q01804 1114 aaKnown RBP11.43□□□□□ -0.58
ACTN1-221ENST00000556571 ZXDCQ2QGD7 858 aaPredicted RBP11.43□□□□□ -0.58
ACTN1-221ENST00000556571 TFDP3Q5H9I0 405 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 ITPRIPL1Q6GPH6 555 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 MYO7BQ6PIF6 2116 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 KIRREL2Q6UWL6 708 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 CNGA4Q8IV77 575 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 TMEM151BQ8IW70 566 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 PARP9Q8IXQ6 854 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 TBC1D21Q8IYX1 336 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 BCORP1Q8N888 145 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 OR5AR1Q8NGP9 310 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 FLVCR1-AS1Q8TAF5 88 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 DNAJC7Q99615 494 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 FERMT1Q9BQL6 677 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 SLC26A1Q9H2B4 701 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 WDR54Q9H977 334 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 OLAHQ9NV23 265 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 SPHK1Q9NYA1 384 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 EURLQ9NYK6 297 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 ASF1AQ9Y294 204 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 AAR2Q9Y312 384 aaKnown RBP11.43□□□□□ -0.58
ACTN1-221ENST00000556571 KLF2Q9Y5W3 355 aaPredicted RBP11.43□□□□□ -0.58
ACTN1-221ENST00000556571 HS3ST3B1Q9Y662 390 aa11.43□□□□□ -0.58
ACTN1-221ENST00000556571 TRBV5-4A0A0C4DH59 114 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 LIN7AO14910 233 aaPredicted RBP11.42□□□□□ -0.58
ACTN1-221ENST00000556571 KDM1AO60341 852 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 JRKO75564 520 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 AP2A2O94973 939 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 COMTP21964 271 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 ACRV1P26436 265 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 MC4RP32245 332 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 GCGRP47871 477 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 ZNF140P52738 457 aaPredicted RBP11.42□□□□□ -0.58
ACTN1-221ENST00000556571 MSLNQ13421 630 aaPredicted RBP11.42□□□□□ -0.58
ACTN1-221ENST00000556571 PRPSAP1Q14558 356 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 KIR2DS3Q14952 304 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 NKG7Q16617 165 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 TUBB8Q3ZCM7 444 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 ISLR2Q6UXK2 745 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 TTLL10Q6ZVT0 673 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 SERPINA9Q86WD7 417 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 CLDN19Q8N6F1 224 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 HAUS1Q96CS2 278 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 CCDC42Q96M95 316 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 LMF1Q96S06 567 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 SPSB2Q99619 263 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 APOL2Q9BQE5 337 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 GORASP1Q9BQQ3 440 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 SEMA3GQ9NS98 782 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 NXT1Q9UKK6 140 aaKnown RBP11.42□□□□□ -0.58
ACTN1-221ENST00000556571 TDRKHQ9Y2W6 561 aaKnown RBP11.42□□□□□ -0.58
ACTN1-221ENST00000556571 HYOU1Q9Y4L1 999 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 DOCK10Q96BY6 2186 aa11.42□□□□□ -0.58
ACTN1-221ENST00000556571 PDZD2O15018 2839 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 hCG_1818297A0A087WSY0 165 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 CCDC78A2IDD5 438 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 ISM1B1AKI9 464 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 AKR1B15C9JRZ8 316 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-221ENST00000556571 PSTPIP1O43586 416 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 MFAP3LO75121 409 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 ALOX12BO75342 701 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 ZRANB2O95218 330 aaKnown RBP eCLIP11.41□□□□□ -0.58
ACTN1-221ENST00000556571 AP2A1O95782 977 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 TPBGLP0DKB5 382 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 ITGAXP20702 1163 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 ACADLP28330 430 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 RBL1P28749 1068 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 PTGER4P35408 488 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 CDKN1CP49918 316 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-221ENST00000556571 PLOD1Q02809 727 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-221ENST00000556571 MFAP5Q13361 173 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms