RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 CES5AQ6NT32 575 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 CDH24Q86UP0 819 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 VANGL1Q8TAA9 524 aaPredicted RBP14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 SLC38A2Q96QD8 506 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 NSUN3Q9H649 340 aaKnown RBP14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 HEMK1Q9Y5R4 338 aaPredicted RBP14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 ZNF701M0R085 212 aaPredicted RBP14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 KPNA3O00505 521 aaPredicted RBP14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 MAGEA8P43361 318 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 BNC1Q01954 994 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 FUBP3Q96I24 572 aaKnown RBP eCLIP14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 POLE4Q9NR33 117 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 TMEM248Q9NWD8 314 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 CASKO14936 926 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 IFNW1P05000 195 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 ENGP17813 658 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 FPR1P21462 350 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 OXTRP30559 389 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 HOXA11P31270 313 aaPredicted RBP14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 PTSQ03393 145 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 IFI44LQ53G44 452 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 ALFQ53S48 1182 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 COQ5Q5HYK3 327 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 KANK2Q63ZY3 851 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 CYP2U1Q7Z449 544 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 DEFB128Q7Z7B8 93 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 TMPRSS11BQ86T26 416 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 QRFPRQ96P65 431 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 CITED4Q96RK1 184 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 FAM118AQ9NWS6 357 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 PTGFRNQ9P2B2 879 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 MAP2K4P45985 399 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 TEAD4Q15561 434 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 DPY19L1Q2PZI1 675 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 METTL3Q86U44 580 aaKnown RBP14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 OR8J3Q8NGG0 315 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 ZNF382Q96SR6 550 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 NUMBLQ9Y6R0 609 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 EFCAB14O75071 495 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 CCNB2O95067 398 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 NUDT6P53370 316 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 TUBA1BP68363 451 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 PTGR1Q14914 329 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 POM121L1PQ3SYA9 428 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 TUBA1AQ71U36 451 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 KRT78Q8N1N4 520 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 TMEM102Q8N9M5 508 aaPredicted RBP14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 OR10G2Q8NGC3 310 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 LHPPQ9H008 270 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 PCDHGB3Q9Y5G1 929 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 PMF1-BGLAPU3KQ54 211 aa14.72□□□□□ -0.05
ARHGEF40-207ENST00000556399 FAM240BA0A1B0GVZ2 78 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 LOC730098B7Z3J9 87 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 ARVCFO00192 962 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 QSOX1O00391 747 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 MPZL2O60487 215 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 CLTBP09497 229 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 TNNI3P19429 210 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 FDXRP22570 491 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 HNF4AP41235 474 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 ABHD18Q0P651 414 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 METTL25Q8N6Q8 603 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 PYCR2Q96C36 320 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 DUSP26Q9BV47 211 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 SLC9A8Q9Y2E8 581 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 PLOD3O60568 738 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 SERPINB7O75635 380 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 KCNA5P22460 613 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 TUBB3Q13509 450 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 CLEC14AQ86T13 490 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 CARM1Q86X55 608 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 CDK20Q8IZL9 346 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 DPP10Q8N608 796 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 ZNF607Q96SK3 696 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 MTERF1Q99551 399 aaKnown RBP14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 TTPALQ9BTX7 342 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 TNKS2Q9H2K2 1166 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 C11orf16Q9NQ32 467 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 AGPAT4Q9NRZ5 378 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 NLE1Q9NVX2 485 aaPredicted RBP14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 SNX7Q9UNH6 387 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 PCSK2P16519 638 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 GSTM2P28161 218 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 AP1S1P61966 158 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 GRIK2Q13002 908 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 RANBP10Q6VN20 620 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 ALDH16A1Q8IZ83 802 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 SCML4Q8N228 414 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 RPL10LQ96L21 214 aaKnown RBP14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 SNTG1Q9NSN8 517 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 ERVK-18Q9QC07 812 aa14.71□□□□□ -0.05
ARHGEF40-207ENST00000556399 PRR23AA6NEV1 266 aa14.71□□□□□ -0.06
ARHGEF40-207ENST00000556399 MANBAO00462 879 aa14.71□□□□□ -0.06
ARHGEF40-207ENST00000556399 AP1G1O43747 822 aa14.71□□□□□ -0.06
ARHGEF40-207ENST00000556399 MATN4O95460 622 aa14.71□□□□□ -0.06
ARHGEF40-207ENST00000556399 CHRNA1P02708 482 aa14.71□□□□□ -0.06
ARHGEF40-207ENST00000556399 C9P02748 559 aa14.71□□□□□ -0.06
ARHGEF40-207ENST00000556399 HAPLN1P10915 354 aaPredicted RBP14.71□□□□□ -0.06
ARHGEF40-207ENST00000556399 PRPS1L1P21108 318 aa14.71□□□□□ -0.06
ARHGEF40-207ENST00000556399 GPX3P22352 226 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms