RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 MICU2Q8IYU8 434 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 TMEM132CQ8N3T6 1108 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 ZCCHC7Q8N3Z6 543 aaKnown RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 DCAF4L2Q8NA75 395 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 DDHD1Q8NEL9 900 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 OR52E4Q8NGH9 312 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 SLC22A17Q8WUG5 538 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 FAM120BQ96EK7 910 aaKnown RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 ITCHQ96J02 903 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 TBCDQ9BTW9 1192 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 HTATIP2Q9BUP3 242 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 NTMT1Q9BV86 223 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 OSBPL10Q9BXB5 764 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 KLF16Q9BXK1 252 aaPredicted RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 TM6SF2Q9BZW4 377 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 PAIP1Q9H074 479 aaKnown RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 CLMPQ9H6B4 373 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 ATP13A3Q9H7F0 1226 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 RDH14Q9HBH5 336 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 PARVBQ9HBI1 364 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 PALMDQ9NP74 551 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 FAM118AQ9NWS6 357 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 C1orf109Q9NX04 203 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 ELOVL2Q9NXB9 296 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 WARS2Q9UGM6 360 aaKnown RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 AFF4Q9UHB7 1163 aaKnown RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 VPS51Q9UID3 782 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 C3orf18Q9UK00 162 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 PDE10AQ9Y233 779 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 CCL27Q9Y4X3 112 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 CENPFP49454 3210 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 SCN8AQ9UQD0 1980 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 FAM220BPB1ANY3 271 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 HS6ST1O60243 411 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 SOCS5O75159 536 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 DNAJB5O75953 348 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 PRKD3O94806 890 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 CD160O95971 181 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 TRBC1P01850 177 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 ANXA5P08758 320 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 TCF3P15923 654 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 ZNF12P17014 697 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 HMGA1P17096 107 aaKnown RBP6.84□□□□□ -1.31
TDP1-213ENST00000555880 RPL17P18621 184 aaKnown RBP6.84□□□□□ -1.31
TDP1-213ENST00000555880 CRHBPP24387 322 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 S100A3P33764 101 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 SHMT2P34897 504 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 SPAM1P38567 509 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 GDF5P43026 501 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 NRIP1P48552 1158 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 CTBSQ01459 385 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 HMGCS1Q01581 520 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 VAC14Q08AM6 782 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 NFATC3Q12968 1075 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 IL18R1Q13478 541 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 CBX2Q14781 532 aaPredicted RBP6.84□□□□□ -1.31
TDP1-213ENST00000555880 KIAA0040Q15053 153 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 PHKG1Q16816 387 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 TBC1D25Q3MII6 688 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 RUNDC3AQ59EK9 446 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 CDKL4Q5MAI5 379 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 GPRC6AQ5T6X5 926 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 MACC1Q6ZN28 852 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 FAM43BQ6ZT52 329 aaPredicted RBP6.84□□□□□ -1.31
TDP1-213ENST00000555880 TAS1R1Q7RTX1 841 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 ZNF554Q86TJ5 538 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 HIPK1Q86Z02 1210 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 CLDN19Q8N6F1 224 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 KRTCAP2Q8N6L1 136 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 SMYD1Q8NB12 490 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 DBF4BQ8NFT6 615 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 PJA1Q8NG27 643 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 OR5K1Q8NHB7 308 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 TBC1D15Q8TC07 691 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 PIH1D2Q8WWB5 315 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 RHBDF1Q96CC6 855 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 TRMT2BQ96GJ1 504 aaKnown RBP6.84□□□□□ -1.31
TDP1-213ENST00000555880 BOCQ9BWV1 1114 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 ELOVL6Q9H5J4 265 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 IL26Q9NPH9 171 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 DCAF13Q9NV06 445 aaKnown RBP6.84□□□□□ -1.31
TDP1-213ENST00000555880 KCTD5Q9NXV2 234 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 STOML2Q9UJZ1 356 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 PSME2Q9UL46 239 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 SNX6Q9UNH7 406 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 BACE2Q9Y5Z0 518 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 PLXNA4Q9HCM2 1894 aa6.84□□□□□ -1.31
TDP1-213ENST00000555880 A0A096LPI6 279 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 TRBV5-4A0A0C4DH59 114 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 A0A1W2PQ45 241 aaPredicted RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 A0A1W2PQY0 241 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 C2orf78A6NCI8 922 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 TRIM64BA6NI03 449 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 LOC730098B7Z3J9 87 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 H0Y858 1186 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 PRRG1O14668 218 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 PER2O15055 1255 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 ADAM12O43184 909 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 B4GAT1O43505 415 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 NOBOXO60393 691 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms