RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 IGHV5-10-1A0A0J9YXX1 117 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 CXorf51AA0A1B0GTR3 108 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 ILVBLA1L0T0 632 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 A1L4Q6 167 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 B4E171 279 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 MKRN2OSH3BPM6 223 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 DUX1O43812 170 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 ZMPSTE24O75844 475 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 RHOBTB3O94955 611 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 ADCY5O95622 1261 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 POP4O95707 220 aaKnown RBP4.84□□□□□ -1.63
ATXN3-228ENST00000554592 MT-ND5P03915 603 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 PRKAR1AP10644 381 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 TCN2P20062 427 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 TNFRSF8P28908 595 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 CD1CP29017 333 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 ALDH4A1P30038 563 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 CSTF2P33240 577 aaKnown RBP eCLIP4.84□□□□□ -1.63
ATXN3-228ENST00000554592 PTGS2P35354 604 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 DCTP40126 519 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 TSPAN7P41732 249 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 UQCRFS1P47985 274 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 ME1P48163 572 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 SERPINH1P50454 418 aaKnown RBP4.84□□□□□ -1.63
ATXN3-228ENST00000554592 SUOXP51687 545 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 COPB1P53618 953 aaKnown RBP4.84□□□□□ -1.63
ATXN3-228ENST00000554592 LIMK2P53671 638 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 OR1D5P58170 312 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 PITX1P78337 314 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-228ENST00000554592 MXRA7P84157 204 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 CDC20Q12834 499 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 NFATC4Q14934 902 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 TAF5Q15542 800 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 MEA1Q16626 185 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 KLHL40Q2TBA0 621 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 MYLK3Q32MK0 819 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 GRAMD1BQ3KR37 738 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 AMZ1Q400G9 498 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 CBWD6Q4V339 395 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 ALFQ53S48 1182 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 CBWD3Q5JTY5 395 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 EFHC1Q5JVL4 640 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 CBWD5Q5RIA9 395 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 ERAP2Q6P179 960 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 ASB18Q6ZVZ8 466 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 TMPRSS9Q7Z410 1059 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 FAM114A1Q8IWE2 563 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 SRRM1Q8IYB3 904 aaKnown RBP4.84□□□□□ -1.63
ATXN3-228ENST00000554592 CCDC13Q8IYE1 715 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 CPT1CQ8TCG5 803 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 CXorf40AQ8TE69 158 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 TEFMQ96QE5 360 aaKnown RBP4.84□□□□□ -1.63
ATXN3-228ENST00000554592 TRIB1Q96RU8 372 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 CRB3Q9BUF7 120 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 APOOQ9BUR5 198 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 MLST8Q9BVC4 326 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 SPRY4Q9C004 299 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 REXO4Q9GZR2 422 aaKnown RBP4.84□□□□□ -1.63
ATXN3-228ENST00000554592 CHST8Q9H2A9 424 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 DPEP2Q9H4A9 486 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 ZDHHC6Q9H6R6 413 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 RDH14Q9HBH5 336 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 ARFGAP3Q9NP61 516 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 TMEM51Q9NW97 253 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 ASNSD1Q9NWL6 643 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 COX16Q9P0S2 106 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 MYO1AQ9UBC5 1043 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 KLQ9UEF7 1012 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 CDC23Q9UJX2 597 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 PILRAQ9UKJ1 303 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 PCDHA7Q9UN72 937 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 TP53TG5Q9Y2B4 290 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 RELNP78509 3460 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 BSNQ9UPA5 3926 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 LOC101059948A0A1B0GTJ6 334 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 MBD3L4A6NDZ8 208 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-228ENST00000554592 MBD3L3A6NE82 208 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-228ENST00000554592 WIPF3A6NGB9 483 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 E5RJQ4 531 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 F5H423 210 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-228ENST00000554592 K7EM74 188 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 OVOL3O00110 214 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 MYO1CO00159 1063 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 MED7O43513 233 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 HSF2BPO75031 334 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 SCAF4O95104 1147 aaKnown RBP4.83□□□□□ -1.64
ATXN3-228ENST00000554592 GSRP00390 522 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 UGT2B4P06133 528 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 ANXA2P07355 339 aaKnown RBP4.83□□□□□ -1.64
ATXN3-228ENST00000554592 HOXC4P09017 264 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-228ENST00000554592 KELP23276 732 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 OAS2P29728 719 aaKnown RBP4.83□□□□□ -1.64
ATXN3-228ENST00000554592 OR1E1P30953 314 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 MAN1A1P33908 653 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 CXCR3P49682 368 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 GEMIN4P57678 1058 aaKnown RBP4.83□□□□□ -1.64
ATXN3-228ENST00000554592 SNX16P57768 344 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 SNRPD1P62314 119 aaKnown RBP4.83□□□□□ -1.64
ATXN3-228ENST00000554592 HSD11B2P80365 405 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 ARF5P84085 180 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms