RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 MMP20O60882 483 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 CPNE3O75131 537 aaKnown RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 MPOP05164 745 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 CBR1P16152 277 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 VEGFBP49765 207 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 PFKFB3Q16875 520 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 TMEM35AQ53FP2 167 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 SLC35F1Q5T1Q4 408 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 MRNIPQ6NTE8 343 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 SCCPDHQ8NBX0 429 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 DBF4BQ8NFT6 615 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 DGCR14Q96DF8 476 aaKnown RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 TRMT61AQ96FX7 289 aaKnown RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 CISHQ9NSE2 258 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 GMEB1Q9Y692 573 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 SPATA31A1Q5TZJ5 1347 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 JCADQ9P266 1359 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 SPTAN1Q13813 2472 aaKnown RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 A0A0A0MRY4 1105 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 HMX3A6NHT5 357 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 IMPA2O14732 288 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 SLC7A4O43246 635 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 SYNGR4O95473 234 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 CD79AP11912 226 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 HSD11B1P28845 292 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 CTHP32929 405 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 GABREP78334 506 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 KCNAB2Q13303 367 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 UBE3CQ15386 1083 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 TEAD2Q15562 447 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 OR4E2Q8NGC2 313 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 OR4K17Q8NGC6 315 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 HCAR2Q8TDS4 363 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 AENQ8WTP8 325 aaKnown RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 SHC3Q92529 594 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF780BQ9Y6R6 833 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 IGKV3OR2-268A0A0C4DH90 116 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 HTN1P15515 57 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 EN2P19622 333 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 S100A1P23297 94 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 MEA1Q16626 185 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 DGUOKQ16854 277 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 DCLRE1AQ6PJP8 1040 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 ETFBKMTQ8IXQ9 262 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 COG8Q96MW5 612 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 OR14J1Q9UGF5 321 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 MGAT4AQ9UM21 535 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 FKBP7Q9Y680 259 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 DOCK5Q9H7D0 1870 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 CENPXA8MT69 81 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 F8VP50 259 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 DNPH1O43598 174 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 STK17BO94768 372 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 MRPL3P09001 348 aaKnown RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 HNF1AP20823 631 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 AP1S2P56377 157 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 FAAP100Q0VG06 881 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 KCNMA1Q12791 1236 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 CRHR2Q13324 411 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 PON2Q15165 354 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 CCDC58Q4VC31 144 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 BEND7Q8N7W2 519 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 OR2S2Q9NQN1 319 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 MAGI2Q86UL8 1455 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 DOCK3Q8IZD9 2030 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 C1QTNF3-AMACRE9PGA6 284 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 OR56A5P0C7T3 313 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 CD44P16070 742 aaKnown RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 POLR2CP19387 275 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 AGFG1P52594 562 aaKnown RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 SLC25A25Q6KCM7 469 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 HTRA1Q92743 480 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 NKX3-1Q99801 234 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 TMED9Q9BVK6 235 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 RSAD1Q9HA92 442 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF446Q9NWS9 450 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 ACAD8Q9UKU7 415 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF609O15014 1411 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 UBDO15205 165 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 THP07101 528 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 MAPK1P28482 360 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 FXYD4P59646 89 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 SNAPC1Q16533 368 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 VASH2Q86V25 355 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 YIPF7Q8N8F6 280 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 OR2A12Q8NGT7 310 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 KCNC2Q96PR1 638 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 FSCN3Q9NQT6 498 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 IKZF3Q9UKT9 509 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 C15orf41Q9Y2V0 281 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 ROBO1Q9Y6N7 1651 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 PDCD5O14737 125 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 TKTP29401 623 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CSTF1Q05048 431 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 SEL1L3Q68CR1 1132 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 OAFQ86UD1 273 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ZFP90Q8TF47 636 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 TSACCQ96A04 125 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 NSMCE2Q96MF7 247 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 C2orf92A0A1B0GVN3 265 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms