RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 SLC52A3Q9NQ40 469 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 UGT2A1Q9Y4X1 527 aa12□□□□□ -0.49
SHMT2-207ENST00000553837 ANKRD12Q6UB98 2062 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 A0A1B0GVM2 712 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 TYW5A2RUC4 315 aaKnown RBP11.99□□□□□ -0.49
SHMT2-207ENST00000553837 IQCF5A8MTL0 148 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 SCO2O43819 266 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 ICMTO60725 284 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 ALX3O95076 343 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 NCK1P16333 377 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 IL7RP16871 459 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 LPOP22079 712 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-207ENST00000553837 ENPP1P22413 925 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 DIO3P55073 304 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 CCL23P55773 120 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 ZXDBP98169 803 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 PLD1Q13393 1074 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 SELPLGQ14242 412 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 GEN1Q17RS7 908 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 CDONQ4KMG0 1287 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 ADGRF1Q5T601 910 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 TUBA3EQ6PEY2 450 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 SCIMPQ6UWF3 145 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 RAB44Q7Z6P3 723 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-207ENST00000553837 SYVN1Q86TM6 617 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 TOR1AIP2Q8NFQ8 470 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 PSMA8Q8TAA3 256 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 WFDC5Q8TCV5 224 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 EEF1AKMT1Q8WVE0 214 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 PLD4Q96BZ4 506 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 TEX37Q96LM6 180 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 CDK5RAP1Q96SZ6 601 aaKnown RBP11.99□□□□□ -0.49
SHMT2-207ENST00000553837 C17orf80Q9BSJ5 609 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 OR2B2Q9GZK3 357 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 TRIT1Q9H3H1 467 aaKnown RBP11.99□□□□□ -0.49
SHMT2-207ENST00000553837 CWH43Q9H720 699 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 ANKHQ9HCJ1 492 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 CREBZFQ9NS37 354 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 FAM118AQ9NWS6 357 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 LHX3Q9UBR4 397 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 PCDHB3Q9Y5E6 796 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 PCDHGA8Q9Y5G5 932 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 ANAPC1Q9H1A4 1944 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 SAGE2PA6NJ88 616 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 C2orf81A6NN90 581 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 BTN3A1O00481 513 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 CDK2AP1O14519 115 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 UPK1BO75841 260 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 MATN4O95460 622 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 MT-ND1P03886 318 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 KRT8P05787 483 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 HGFP14210 728 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 PKMP14618 531 aaKnown RBP11.99□□□□□ -0.49
SHMT2-207ENST00000553837 PCMT1P22061 227 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 EEFSECP57772 596 aaKnown RBP11.99□□□□□ -0.49
SHMT2-207ENST00000553837 COPZ1P61923 177 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 RAD51Q06609 339 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 VAC14Q08AM6 782 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 LCP2Q13094 533 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 NOGQ13253 232 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 RPS6KA2Q15349 733 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 MEP1AQ16819 746 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 ZNF181Q2M3W8 571 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 ADPRMQ3LIE5 342 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 ATXN7L2Q5T6C5 722 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-207ENST00000553837 NCEH1Q6PIU2 408 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 CHST9Q7L1S5 443 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 TMEM150AQ86TG1 271 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 STK32CQ86UX6 486 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 RIMKLAQ8IXN7 391 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 DCBLD1Q8N8Z6 715 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 NDNFQ8TB73 568 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 CD200R1Q8TD46 325 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 TSPEARQ8WU66 669 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 HTRA1Q92743 480 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 TUBGCP3Q96CW5 907 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 TOR3AQ9H497 397 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 NTN4Q9HB63 628 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 SYTL2Q9HCH5 934 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 NAALAD2Q9Y3Q0 740 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 PCDHGA3Q9Y5H0 932 aa11.99□□□□□ -0.49
SHMT2-207ENST00000553837 PLXNA4Q9HCM2 1894 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 K7ERQ8 282 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 KLK8O60259 260 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 PRSS23O95084 383 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 C1RP00736 705 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 MYCP01106 439 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-207ENST00000553837 CDH1P12830 882 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 ZFP36L2P47974 494 aaKnown RBP11.98□□□□□ -0.49
SHMT2-207ENST00000553837 IST1P53990 364 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 GNG2P59768 71 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 PIGFQ07326 219 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 SLC13A2Q13183 592 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 NFYCQ13952 458 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 ACOX1Q15067 660 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 CARTPTQ16568 116 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 C18orf21Q32NC0 220 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-207ENST00000553837 ZRANB3Q5FWF4 1079 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 PAGE2Q7Z2X7 111 aa11.98□□□□□ -0.49
SHMT2-207ENST00000553837 LYSMD2Q8IV50 215 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms