RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 ALDOAP04075 364 aaKnown RBP4.92□□□□□ -1.62
VTI1B-202ENST00000553619 CD3EP07766 207 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 CCDC166P0CW27 439 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 TPBGLP0DKB5 382 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 ENO3P13929 434 aaPredicted RBP4.92□□□□□ -1.62
VTI1B-202ENST00000553619 VCLP18206 1134 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 FDXRP22570 491 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 HNRNPA2B1P22626 353 aaKnown RBP4.92□□□□□ -1.62
VTI1B-202ENST00000553619 TRIM23P36406 574 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 MDH1P40925 334 aaKnown RBP4.92□□□□□ -1.62
VTI1B-202ENST00000553619 CTSKP43235 329 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 MAGEA12P43365 314 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 CDKN1CP49918 316 aaPredicted RBP4.92□□□□□ -1.62
VTI1B-202ENST00000553619 METAP1P53582 386 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 ADPRHP54922 357 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 TAS2R38P59533 333 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 TAS2R39P59534 338 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 SEMG2Q02383 582 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 BMPR2Q13873 1038 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 PTK2BQ14289 1009 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 SEMA3AQ14563 771 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 ZKSCAN8Q15776 578 aaPredicted RBP4.92□□□□□ -1.62
VTI1B-202ENST00000553619 VMACQ2NL98 169 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 WSCD2Q2TBF2 565 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 GPRC6AQ5T6X5 926 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 ATG16L1Q676U5 607 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 KIAA0895LQ68EN5 471 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 ANO7Q6IWH7 933 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 ZC3H14Q6PJT7 736 aaKnown RBP4.92□□□□□ -1.62
VTI1B-202ENST00000553619 LVRNQ6Q4G3 990 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 TMEM220Q6QAJ8 160 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 SH2D5Q6ZV89 423 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 OTOAQ7RTW8 1153 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 LDB1Q86U70 411 aaPredicted RBP4.92□□□□□ -1.62
VTI1B-202ENST00000553619 SLCO6A1Q86UG4 719 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 FAM124AQ86V42 546 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 TAX1BP1Q86VP1 789 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 SLC41A1Q8IVJ1 513 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 SLC22A9Q8IVM8 553 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 PIANPQ8IYJ0 282 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 TMEFF1Q8IYR6 380 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 C4orf33Q8N1A6 199 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 MYO1HQ8N1T3 1032 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 ANKRD42Q8N9B4 389 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 CADM4Q8NFZ8 388 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 PPP1R14CQ8TAE6 165 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 RHEBL1Q8TAI7 183 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 STAG3L4Q8TBR4 150 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 RDH11Q8TC12 318 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 TCP10LQ8TDR4 215 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 MZB1Q8WU39 189 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 ASZ1Q8WWH4 475 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 TMEM159Q96B96 161 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 ERLEC1Q96DZ1 483 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 ATXN7L3BQ96GX2 97 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 PDLIM5Q96HC4 596 aaKnown RBP4.92□□□□□ -1.62
VTI1B-202ENST00000553619 SERAC1Q96JX3 654 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 FOPNLQ96NB1 174 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 BIRC8Q96P09 236 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 PAIP2Q9BPZ3 127 aaKnown RBP4.92□□□□□ -1.62
VTI1B-202ENST00000553619 MRPL57Q9BQC6 102 aaKnown RBP4.92□□□□□ -1.62
VTI1B-202ENST00000553619 CCM2Q9BSQ5 444 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 APOOQ9BUR5 198 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 CAPS2Q9BXY5 557 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 P2RY12Q9H244 342 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 TFB2MQ9H5Q4 396 aaKnown RBP4.92□□□□□ -1.62
VTI1B-202ENST00000553619 GP6Q9HCN6 339 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 MUTYHQ9UIF7 546 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 ADAM21Q9UKJ8 722 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 PPT2Q9UMR5 302 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 ZFR2Q9UPR6 939 aaKnown RBP4.92□□□□□ -1.62
VTI1B-202ENST00000553619 ITM2BQ9Y287 266 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 COQ6Q9Y2Z9 468 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 MTF2Q9Y483 593 aaPredicted RBP4.92□□□□□ -1.62
VTI1B-202ENST00000553619 COL4A3Q01955 1670 aa4.92□□□□□ -1.62
VTI1B-202ENST00000553619 ZNF106Q9H2Y7 1883 aaKnown RBP4.92□□□□□ -1.62
VTI1B-202ENST00000553619 SCN8AQ9UQD0 1980 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 PRR23AA6NEV1 266 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 ANTXRLA6NF34 631 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 SRRM3A6NNA2 597 aaPredicted RBP4.91□□□□□ -1.62
VTI1B-202ENST00000553619 GAPDHSO14556 408 aaPredicted RBP4.91□□□□□ -1.62
VTI1B-202ENST00000553619 LIN7AO14910 233 aaPredicted RBP4.91□□□□□ -1.62
VTI1B-202ENST00000553619 INPP4BO15327 924 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 SLC16A5O15375 505 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 SLC31A1O15431 190 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 ZBTB14O43829 449 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 KDM1AO60341 852 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 OR1I1O60431 355 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 DNAJC6O75061 913 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 SMIM24O75264 130 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 H2AFYO75367 372 aaKnown RBP4.91□□□□□ -1.62
VTI1B-202ENST00000553619 S100BP04271 92 aaPredicted RBP4.91□□□□□ -1.62
VTI1B-202ENST00000553619 PCCBP05166 539 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 HIST1H2AGP0C0S8 130 aaPredicted RBP4.91□□□□□ -1.62
VTI1B-202ENST00000553619 MPC1LP0DKB6 136 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 MYCLP1P12525 358 aaPredicted RBP4.91□□□□□ -1.62
VTI1B-202ENST00000553619 CPA3P15088 417 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 CHN1P15882 459 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 GM2AP17900 193 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 AOC1P19801 751 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms