RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 TBC1D25Q3MII6 688 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 TAF1BQ53T94 588 aaPredicted RBP9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 ZC3H12BQ5HYM0 836 aaKnown RBP9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 HECTD2Q5U5R9 776 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 BROXQ5VW32 411 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 KLC3Q6P597 504 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 CLEC14AQ86T13 490 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 LCA5Q86VQ0 697 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 KRT222Q8N1A0 295 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 TCAIMQ8N3R3 496 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 TBC1D19Q8N5T2 526 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 KDF1Q8NAX2 398 aaPredicted RBP9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 SIDT2Q8NBJ9 832 aaKnown RBP9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 ZNF248Q8NDW4 579 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 OR5AR1Q8NGP9 310 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 CD200R1Q8TD46 325 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 GATA6Q92908 595 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 MTBPQ96DY7 904 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 CABS1Q96KC9 395 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 TSNARE1Q96NA8 513 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 TGM7Q96PF1 710 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 GPR22Q99680 433 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 RBBP8Q99708 897 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 C17orf62Q9BQA9 187 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 SLC12A9Q9BXP2 914 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 CAPS2Q9BXY5 557 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 SEMA6CQ9H3T2 930 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 ACSS3Q9H6R3 686 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 CNOT10Q9H9A5 744 aaKnown RBP9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 GPAMQ9HCL2 828 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 SLC39A1Q9NY26 324 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 ZNF180Q9UJW8 692 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 SERTAD3Q9UJW9 196 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 TLK1Q9UKI8 766 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 POMT2Q9UKY4 750 aa9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 ATXN7L1Q9ULK2 861 aaPredicted RBP9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 CFAP20Q9Y6A4 193 aaKnown RBP9.96□□□□□ -0.82
TRAFD1-208ENST00000552890 A0A0J9YY10 115 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 FAM95CA0A1B0GW59 222 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 STMND1H3BQB6 276 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 MYO1CO00159 1063 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 TXNDC9O14530 226 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 BANF1O75531 89 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 TNFSF15O95150 251 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 CHRM5P08912 532 aaPredicted RBP9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 RHOXF2BP0C7M4 288 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 FDXRP22570 491 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 OAS2P29728 719 aaKnown RBP9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 PRDX3P30048 256 aaKnown RBP9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 PKLRP30613 574 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 MSH2P43246 934 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 MRPS25P82663 173 aaKnown RBP9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 RELAQ04206 551 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 FASTKD3Q14CZ7 662 aaKnown RBP9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 CYP2A13Q16696 494 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 FAM83EQ2M2I3 478 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 KBTBD12Q3ZCT8 623 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 ACSBG2Q5FVE4 666 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 C3orf38Q5JPI3 329 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 TEX35Q5T0J7 233 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 NKAIN2Q5VXU1 208 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 TRMT10BQ6PF06 316 aaKnown RBP9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 SPESP1Q6UW49 350 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 UBE2R2Q712K3 238 aaPredicted RBP9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 TBC1D1Q86TI0 1168 aaPredicted RBP9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 FAM129CQ86XR2 697 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 HOMEZQ8IX15 550 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 GPR135Q8IZ08 494 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 LILRA3Q8N6C8 439 aaPredicted RBP9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 PPM1NQ8N819 430 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 SNIP1Q8TAD8 396 aaKnown RBP9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 FBF1Q8TES7 1133 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 SLC41A2Q96JW4 573 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 RHOXF2Q9BQY4 288 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 PITPNM3Q9BZ71 974 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 NMRAL1Q9HBL8 299 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 SOHLH2Q9NX45 425 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 ACTR10Q9NZ32 417 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 IL1RAPL1Q9NZN1 696 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 RARRES3Q9UL19 164 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 SATB2Q9UPW6 733 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 BTRCQ9Y297 605 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 AP1M2Q9Y6Q5 423 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 PTPRBP23467 1997 aa9.95□□□□□ -0.82
TRAFD1-208ENST00000552890 CHD8Q9HCK8 2581 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 A0A087X1B8 175 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 FAM149AA5PLN7 773 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 EFCAB7A8K855 629 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 SYCE1LA8MT33 242 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 ISM1B1AKI9 464 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 IPO13O94829 963 aaKnown RBP9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 S100BP04271 92 aaPredicted RBP9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 COL6A2P12110 1019 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 ZNF37AP17032 561 aaPredicted RBP9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 POLR2CP19387 275 aaPredicted RBP9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 CMPK1P30085 196 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 HPDP32754 393 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms