RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 C2orf74A8MZ97 194 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 EIF3FO00303 357 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-225ENST00000551845 BTN3A3O00478 584 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 KIF1CO43896 1103 aaKnown RBP10.3□□□□□ -0.76
PTCH1-225ENST00000551845 BRINP1O60477 761 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 DXOO77932 396 aaKnown RBP10.3□□□□□ -0.76
PTCH1-225ENST00000551845 ANKRD34CP0C6C1 535 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 CCL4P13236 92 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 HGFP14210 728 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 SAT1P21673 171 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 MCM3P25205 808 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 MAP4P27816 1152 aaKnown RBP10.3□□□□□ -0.76
PTCH1-225ENST00000551845 PRDX3P30048 256 aaKnown RBP10.3□□□□□ -0.76
PTCH1-225ENST00000551845 EIF2S3P41091 472 aaKnown RBP10.3□□□□□ -0.76
PTCH1-225ENST00000551845 SEPHS1P49903 392 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 RAB28P51157 221 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 MAPK10P53779 464 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 SLC12A2P55011 1212 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 GBX1Q14549 363 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 SLMAPQ14BN4 828 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 RBM20Q5T481 1227 aaKnown RBP10.3□□□□□ -0.76
PTCH1-225ENST00000551845 GRTP1Q5TC63 336 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 PAQR3Q6TCH7 311 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 CYHR1Q6ZMK1 362 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 GPR155Q7Z3F1 870 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 ZC3HC1Q86WB0 502 aaKnown RBP10.3□□□□□ -0.76
PTCH1-225ENST00000551845 CARFQ8N187 725 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 CD200R1Q8TD46 325 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 FBF1Q8TES7 1133 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 KLHL6Q8WZ60 621 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 FGF11Q92914 225 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 SLC22A18Q96BI1 424 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 PRR11Q96HE9 360 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-225ENST00000551845 TAAR9Q96RI9 348 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 SLC30A3Q99726 388 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 MAP3K3Q99759 626 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 CPNE1Q99829 537 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 B3GNT4Q9C0J1 378 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 SYTL2Q9HCH5 934 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 SMYD2Q9NRG4 433 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 SLC39A1Q9NY26 324 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 SLC17A6Q9P2U8 582 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 NFU1Q9UMS0 254 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 NFS1Q9Y697 457 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 LRP4O75096 1905 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 MN1Q10571 1320 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-225ENST00000551845 SCN8AQ9UQD0 1980 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 TEX51A0A1B0GUA7 166 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 A0A1W2PNU3 283 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-225ENST00000551845 FAM159BA6NKW6 160 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 CXorf49A8MYA2 514 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-225ENST00000551845 ISM1B1AKI9 464 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 B4E171 279 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 NVLO15381 856 aaKnown RBP10.29□□□□□ -0.76
PTCH1-225ENST00000551845 TLX3O43711 291 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-225ENST00000551845 PSIP1O75475 530 aaKnown RBP10.29□□□□□ -0.76
PTCH1-225ENST00000551845 CATP04040 527 aaKnown RBP10.29□□□□□ -0.76
PTCH1-225ENST00000551845 ITGA2BP08514 1039 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 TPBGLP0DKB5 382 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 FGF3P11487 239 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-225ENST00000551845 ITIH1P19827 911 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 CDH3P22223 829 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 SPRP35270 261 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-225ENST00000551845 HSD17B2P37059 387 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 GP5P40197 560 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 TSPAN7P41732 249 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 CDKN2DP55273 166 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 IL2P60568 153 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 MC2RQ01718 297 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 TBC1D25Q3MII6 688 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 KBTBD12Q3ZCT8 623 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 TAF1BQ53T94 588 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-225ENST00000551845 TMTC4Q5T4D3 741 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 DCAF12Q5T6F0 453 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 CYB5D1Q6P9G0 228 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 PRSS42Q7Z5A4 293 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 FAM129CQ86XR2 697 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 KMT5CQ86Y97 462 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 CPNE9Q8IYJ1 553 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 ADGRF3Q8IZF5 1079 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 MYO1HQ8N1T3 1032 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 PPM1NQ8N819 430 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 GIMAP7Q8NHV1 300 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 MCOLN3Q8TDD5 553 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 EEF1AKMT1Q8WVE0 214 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 ASB11Q8WXH4 323 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 USP7Q93009 1102 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 ELMO2Q96JJ3 720 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 CYTH2Q99418 400 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 RAB11FIP5Q9BXF6 653 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 ASPSCR1Q9BZE9 553 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 RHOJQ9H4E5 214 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 ZNF768Q9H5H4 540 aaKnown RBP10.29□□□□□ -0.76
PTCH1-225ENST00000551845 FBXO8Q9NRD0 319 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 C1GALT1Q9NS00 363 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 OCIAD1Q9NX40 245 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 ACTR10Q9NZ32 417 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 SEMA5BQ9P283 1151 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 TSR3Q9UJK0 312 aaKnown RBP10.29□□□□□ -0.76
PTCH1-225ENST00000551845 PLAGL1Q9UM63 463 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms