RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 OR2L2Q8NH16 312 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 CCDC110Q8TBZ0 833 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 LCN9Q8WX39 176 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 DNAJC1Q96KC8 554 aaKnown RBP6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 TRAPPC9Q96Q05 1148 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 SRMSQ9H3Y6 488 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 KIR3DX1Q9H7L2 352 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 ACTR5Q9H9F9 607 aaPredicted RBP6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 MLXIPLQ9NP71 852 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 SEMA5BQ9P283 1151 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 IMPACTQ9P2X3 320 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 NFKBIL1Q9UBC1 381 aaPredicted RBP6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 POMT2Q9UKY4 750 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 TDRKHQ9Y2W6 561 aaKnown RBP6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 PTRH2Q9Y3E5 179 aaKnown RBP6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 ADGRG4Q8IZF6 3080 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 PDZD2O15018 2839 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 CSMD2Q7Z408 3487 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 hCG_1818297A0A087WSY0 165 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 A0A0U1RQJ8 604 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 ARHGAP10A1A4S6 786 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 SHISA8B8ZZ34 492 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 ZNHIT1O43257 154 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 OIP5O43482 229 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 KLF7O75840 302 aaPredicted RBP6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 MT-ND3P03897 115 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 KLK3P07288 261 aaPredicted RBP6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 F7P08709 466 aaPredicted RBP6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 ALAS2P22557 587 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 PEBP1P30086 187 aaKnown RBP6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 ADRA1AP35348 466 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 GLRBP48167 497 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 PDE1BQ01064 536 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 DMPKQ09013 629 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 MSLNQ13421 630 aaPredicted RBP6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 CCDC38Q502W7 563 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 ODF2Q5BJF6 829 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 ZRANB3Q5FWF4 1079 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 LDLRAP1Q5SW96 308 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 PDPK2PQ6A1A2 396 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 DENND5AQ6IQ26 1287 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 MRGPREQ86SM8 312 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 CUZD1Q86UP6 607 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 SERPINA9Q86WD7 417 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 PRSS58Q8IYP2 241 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 ADGRF3Q8IZF5 1079 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 EDARADDQ8WWZ3 215 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 P3H4Q92791 437 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 IL17FQ96PD4 163 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 QKIQ96PU8 341 aaKnown RBP eCLIP6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 FCRL5Q96RD9 977 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 DNAJC7Q99615 494 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 FSD1LQ9BXM9 530 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 GPR87Q9BY21 358 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 SLC7A5P2Q9GIP4 190 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 RAB33BQ9H082 229 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 OR52A5Q9H2C5 316 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 RASSF4Q9H2L5 321 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 RAD18Q9NS91 495 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 SLC22A11Q9NSA0 550 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 IRAK4Q9NWZ3 460 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 GPR83Q9NYM4 423 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 ACTR10Q9NZ32 417 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 CRLS1Q9UJA2 301 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 ICKQ9UPZ9 632 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 PKP3Q9Y446 797 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 ALG6Q9Y672 507 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 DUSP10Q9Y6W6 482 aa6.61□□□□□ -1.35
PRPF40B-214ENST00000551320 MAP1AP78559 2803 aaPredicted RBP6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 TCRBV7S2A1N4TA0A589 114 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 GPR89AB7ZAQ6 455 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 GOLGA6L19H0YKK7 550 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 KCNN4O15554 427 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 OR1I1O60431 355 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 CEACAM4O75871 244 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 MED26O95402 600 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 CBX6O95503 412 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 LDLRP01130 860 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 UMODP07911 640 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 SNRPB2P08579 225 aaKnown RBP6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 GPR89BP0CG08 455 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 UGT2B7P16662 529 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 ITGAXP20702 1163 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 LPOP22079 712 aaPredicted RBP6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 MC4RP32245 332 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 ARHGAP25P42331 645 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 VAV2P52735 878 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 ZNF140P52738 457 aaPredicted RBP6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 YBX1P67809 324 aaKnown RBP6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 OTUD4Q01804 1114 aaKnown RBP6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 POU6F1Q14863 301 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 NCF4Q15080 339 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 TAZQ16635 292 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 LONRF2Q1L5Z9 754 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 ZNF658BQ4V348 819 aaPredicted RBP6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 ANKRD20A2Q5SQ80 823 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 TMTC4Q5T4D3 741 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 ANKRD20A1Q5TYW2 823 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 ANKRD20A3Q5VUR7 823 aa6.6□□□□□ -1.35
PRPF40B-214ENST00000551320 IZUMO3Q5VZ72 239 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms