RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 CLDN19Q8N6F1 224 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 ATP6V1C2Q8NEY4 427 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 SHKBP1Q8TBC3 707 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 PPP1R14AQ96A00 147 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 ITCHQ96J02 903 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 PDE7BQ9NP56 450 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 FZD3Q9NPG1 666 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 PNO1Q9NRX1 252 aaKnown RBP11.95□□□□□ -0.5
NR4A1-215ENST00000550557 MKL2Q9ULH7 1088 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 VEGFDO43915 354 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 PGM3O95394 542 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 POLR2CP19387 275 aaPredicted RBP11.95□□□□□ -0.5
NR4A1-215ENST00000550557 FASP25445 335 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 SOX9P48436 509 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 GALK1P51570 392 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 SAMD4BQ5PRF9 694 aaKnown RBP11.95□□□□□ -0.5
NR4A1-215ENST00000550557 SLC9A4Q6AI14 798 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 ISLR2Q6UXK2 745 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 DHFR2Q86XF0 187 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 DNASE1L2Q92874 299 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 PHF7Q9BWX1 381 aaPredicted RBP11.95□□□□□ -0.5
NR4A1-215ENST00000550557 MRPS26Q9BYN8 205 aaKnown RBP11.95□□□□□ -0.5
NR4A1-215ENST00000550557 TAC3Q9UHF0 121 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 A8MUA0 341 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 LDB2O43679 373 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 C4BPBP20851 252 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 RPL5P46777 297 aaKnown RBP11.95□□□□□ -0.5
NR4A1-215ENST00000550557 ARCN1P48444 511 aaKnown RBP11.95□□□□□ -0.5
NR4A1-215ENST00000550557 NRG3P56975 720 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 LRRC69Q6ZNQ3 347 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 TMEM26Q6ZUK4 368 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 UMODL1-AS1Q8N2C9 162 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 C3orf58Q8NDZ4 430 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 RTP3Q9BQQ7 232 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 HERPUD2Q9BSE4 406 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 EFCAB11Q9BUY7 163 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 TAS2R1Q9NYW7 299 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 DNMT3BQ9UBC3 853 aaKnown RBP11.95□□□□□ -0.5
NR4A1-215ENST00000550557 MYRFQ9Y2G1 1151 aa11.95□□□□□ -0.5
NR4A1-215ENST00000550557 TCEA1P23193 301 aaKnown RBP11.94□□□□□ -0.5
NR4A1-215ENST00000550557 HOXC12P31275 282 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 SLC1A2P43004 574 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 TNFRSF4P43489 277 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 KIR3DL1P43629 444 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 AP1S2P56377 157 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 TAS2R39P59534 338 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 PITX1P78337 314 aaPredicted RBP11.94□□□□□ -0.5
NR4A1-215ENST00000550557 SLC9A5Q14940 896 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 MSS51Q4VC12 460 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 FAM78AQ5JUQ0 283 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 C9orf50Q5SZB4 431 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 LPCAT4Q643R3 524 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 LHX8Q68G74 356 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 FAM171BQ6P995 826 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 APCDD1Q8J025 514 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 OR52L1Q8NGH7 329 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 RNF145Q96MT1 663 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 PEBP4Q96S96 227 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 CAB39Q9Y376 341 aaPredicted RBP11.94□□□□□ -0.5
NR4A1-215ENST00000550557 A0A0G2JN53 185 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 RGSL1A5PLK6 1076 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 GMFGO60234 142 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 RABIFP47224 123 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 SQLEQ14534 574 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 ZNF598Q86UK7 904 aaKnown RBP11.94□□□□□ -0.5
NR4A1-215ENST00000550557 DCUN1D3Q8IWE4 304 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 GJD3Q8N144 294 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 LIX1Q8N485 282 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 RLN3Q8WXF3 142 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 MARK4Q96L34 752 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 HSPA12BQ96MM6 686 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 IL21RQ9HBE5 538 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 STMN3Q9NZ72 180 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 PACSIN3Q9UKS6 424 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 TIMM22Q9Y584 194 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 TEX264Q9Y6I9 313 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 DGKBQ9Y6T7 804 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 WASF2Q9Y6W5 498 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 ADAM12O43184 909 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 IDO1P14902 403 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 HNRNPA2B1P22626 353 aaKnown RBP11.94□□□□□ -0.5
NR4A1-215ENST00000550557 SLC6A2P23975 617 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 TTKP33981 857 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 MPP2Q14168 576 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 PRKD1Q15139 912 aaPredicted RBP11.94□□□□□ -0.5
NR4A1-215ENST00000550557 RP9Q8TA86 221 aaKnown RBP11.94□□□□□ -0.5
NR4A1-215ENST00000550557 PYCR2Q96C36 320 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 BDH2Q9BUT1 245 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 ZBP1Q9H171 429 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 SEMA6AQ9H2E6 1030 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 HCN2Q9UL51 889 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 TOP3BO95985 862 aaKnown RBP11.94□□□□□ -0.5
NR4A1-215ENST00000550557 EPOP01588 193 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 SHMT2P34897 504 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 CLCQ05315 142 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 TRMT10BQ6PF06 316 aaKnown RBP11.94□□□□□ -0.5
NR4A1-215ENST00000550557 MFSD6LQ8IWD5 586 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 EID3Q8N140 333 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 RTKNQ9BST9 563 aa11.94□□□□□ -0.5
NR4A1-215ENST00000550557 SNRPB2P08579 225 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms