RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 MYBPC3Q14896 1274 aa20.91■□□□□ 0.94
SMARCC2-210ENST00000550519 KYNUQ16719 465 aa20.91■□□□□ 0.94
SMARCC2-210ENST00000550519 P3H1Q32P28 736 aa20.91■□□□□ 0.94
SMARCC2-210ENST00000550519 DOPEY1Q5JWR5 2465 aa20.91■□□□□ 0.94
SMARCC2-210ENST00000550519 MRPL14Q6P1L8 145 aaKnown RBP20.91■□□□□ 0.94
SMARCC2-210ENST00000550519 TLDC1Q6P9B6 456 aa20.91■□□□□ 0.94
SMARCC2-210ENST00000550519 NAPRTQ6XQN6 538 aa20.91■□□□□ 0.94
SMARCC2-210ENST00000550519 IQCKQ8N0W5 287 aa20.91■□□□□ 0.94
SMARCC2-210ENST00000550519 GALNT16Q8N428 558 aa20.91■□□□□ 0.94
SMARCC2-210ENST00000550519 ZNF655Q8N720 491 aaPredicted RBP20.91■□□□□ 0.94
SMARCC2-210ENST00000550519 CLEC1AQ8NC01 280 aa20.91■□□□□ 0.94
SMARCC2-210ENST00000550519 ALS2CR12Q96Q35 445 aa20.91■□□□□ 0.94
SMARCC2-210ENST00000550519 MAP10Q9P2G4 905 aa20.91■□□□□ 0.94
SMARCC2-210ENST00000550519 IFT80Q9P2H3 777 aaPredicted RBP20.91■□□□□ 0.94
SMARCC2-210ENST00000550519 CDYLQ9Y232 598 aa20.91■□□□□ 0.94
SMARCC2-210ENST00000550519 B3GNT3Q9Y2A9 372 aa20.91■□□□□ 0.94
SMARCC2-210ENST00000550519 PIKFYVEQ9Y2I7 2098 aa20.91■□□□□ 0.94
SMARCC2-210ENST00000550519 TDRKHQ9Y2W6 561 aaKnown RBP20.91■□□□□ 0.94
SMARCC2-210ENST00000550519 PEX12O00623 359 aa20.9■□□□□ 0.94
SMARCC2-210ENST00000550519 PSMD3O43242 534 aa20.9■□□□□ 0.94
SMARCC2-210ENST00000550519 PEBP1P30086 187 aaKnown RBP20.9■□□□□ 0.94
SMARCC2-210ENST00000550519 SOX8P57073 446 aa20.9■□□□□ 0.94
SMARCC2-210ENST00000550519 KLF1Q13351 362 aaPredicted RBP20.9■□□□□ 0.94
SMARCC2-210ENST00000550519 KIR2DS3Q14952 304 aa20.9■□□□□ 0.94
SMARCC2-210ENST00000550519 SLC5A12Q1EHB4 618 aa20.9■□□□□ 0.94
SMARCC2-210ENST00000550519 NKAIN1Q4KMZ8 207 aa20.9■□□□□ 0.94
SMARCC2-210ENST00000550519 SLC35B2Q8TB61 432 aa20.9■□□□□ 0.94
SMARCC2-210ENST00000550519 PTERQ96BW5 349 aa20.9■□□□□ 0.94
SMARCC2-210ENST00000550519 ZNF552Q9H707 407 aaPredicted RBP20.9■□□□□ 0.94
SMARCC2-210ENST00000550519 P4HTMQ9NXG6 502 aa20.9■□□□□ 0.94
SMARCC2-210ENST00000550519 NDOR1Q9UHB4 597 aa20.9■□□□□ 0.94
SMARCC2-210ENST00000550519 PLCL2Q9UPR0 1127 aa20.9■□□□□ 0.94
SMARCC2-210ENST00000550519 R3HDM2Q9Y2K5 976 aaKnown RBP20.9■□□□□ 0.94
SMARCC2-210ENST00000550519 CCDC78A2IDD5 438 aa20.89■□□□□ 0.93
SMARCC2-210ENST00000550519 CCDC162PA2VCL2 907 aa20.89■□□□□ 0.93
SMARCC2-210ENST00000550519 KLHL41O60662 606 aa20.89■□□□□ 0.93
SMARCC2-210ENST00000550519 IPO7O95373 1038 aaKnown RBP20.89■□□□□ 0.93
SMARCC2-210ENST00000550519 ALPPP05187 535 aa20.89■□□□□ 0.93
SMARCC2-210ENST00000550519 OR56A5P0C7T3 313 aa20.89■□□□□ 0.93
SMARCC2-210ENST00000550519 GCGRP47871 477 aa20.89■□□□□ 0.93
SMARCC2-210ENST00000550519 PPP1R32Q7Z5V6 425 aa20.89■□□□□ 0.93
SMARCC2-210ENST00000550519 LINC00523Q86TU6 105 aa20.89■□□□□ 0.93
SMARCC2-210ENST00000550519 OR13J1Q8NGT2 312 aa20.89■□□□□ 0.93
SMARCC2-210ENST00000550519 PRR7Q8TB68 274 aa20.89■□□□□ 0.93
SMARCC2-210ENST00000550519 TMEM121Q9BTD3 319 aa20.89■□□□□ 0.93
SMARCC2-210ENST00000550519 TXLNGQ9NUQ3 528 aa20.89■□□□□ 0.93
SMARCC2-210ENST00000550519 ASF1BQ9NVP2 202 aa20.89■□□□□ 0.93
SMARCC2-210ENST00000550519 PLAGL1Q9UM63 463 aa20.89■□□□□ 0.93
SMARCC2-210ENST00000550519 WIPF3A6NGB9 483 aa20.88■□□□□ 0.93
SMARCC2-210ENST00000550519 ISM1B1AKI9 464 aa20.88■□□□□ 0.93
SMARCC2-210ENST00000550519 KDM1AO60341 852 aa20.88■□□□□ 0.93
SMARCC2-210ENST00000550519 CBX6O95503 412 aa20.88■□□□□ 0.93
SMARCC2-210ENST00000550519 UMODP07911 640 aa20.88■□□□□ 0.93
SMARCC2-210ENST00000550519 FOXL2P58012 376 aa20.88■□□□□ 0.93
SMARCC2-210ENST00000550519 SLC9A5Q14940 896 aa20.88■□□□□ 0.93
SMARCC2-210ENST00000550519 SYTL3Q4VX76 610 aa20.88■□□□□ 0.93
SMARCC2-210ENST00000550519 CCDC38Q502W7 563 aa20.88■□□□□ 0.93
SMARCC2-210ENST00000550519 CRB2Q5IJ48 1285 aa20.88■□□□□ 0.93
SMARCC2-210ENST00000550519 LYPLAL1Q5VWZ2 237 aa20.88■□□□□ 0.93
SMARCC2-210ENST00000550519 RAD9BQ6WBX8 426 aa20.88■□□□□ 0.93
SMARCC2-210ENST00000550519 TMEM151BQ8IW70 566 aa20.88■□□□□ 0.93
SMARCC2-210ENST00000550519 CISD2Q8N5K1 135 aaKnown RBP20.88■□□□□ 0.93
SMARCC2-210ENST00000550519 SLC22A11Q9NSA0 550 aa20.88■□□□□ 0.93
SMARCC2-210ENST00000550519 AMFRQ9UKV5 643 aa20.88■□□□□ 0.93
SMARCC2-210ENST00000550519 A1L4Q6 167 aa20.87■□□□□ 0.93
SMARCC2-210ENST00000550519 MASP2O00187 686 aa20.87■□□□□ 0.93
SMARCC2-210ENST00000550519 OR1I1O60431 355 aa20.87■□□□□ 0.93
SMARCC2-210ENST00000550519 IPO13O94829 963 aaKnown RBP20.87■□□□□ 0.93
SMARCC2-210ENST00000550519 PTMAP06454 111 aaKnown RBP20.87■□□□□ 0.93
SMARCC2-210ENST00000550519 PKLRP30613 574 aa20.87■□□□□ 0.93
SMARCC2-210ENST00000550519 NR6A1Q15406 480 aa20.87■□□□□ 0.93
SMARCC2-210ENST00000550519 DNAJC21Q5F1R6 531 aaKnown RBP20.87■□□□□ 0.93
SMARCC2-210ENST00000550519 TAB3Q8N5C8 712 aaPredicted RBP20.87■□□□□ 0.93
SMARCC2-210ENST00000550519 OR52K1Q8NGK4 314 aa20.87■□□□□ 0.93
SMARCC2-210ENST00000550519 HDAC10Q969S8 669 aa20.87■□□□□ 0.93
SMARCC2-210ENST00000550519 NACC2Q96BF6 587 aa20.87■□□□□ 0.93
SMARCC2-210ENST00000550519 NDC1Q9BTX1 674 aa20.87■□□□□ 0.93
SMARCC2-210ENST00000550519 MENTQ9BUN1 341 aa20.87■□□□□ 0.93
SMARCC2-210ENST00000550519 EURLQ9NYK6 297 aa20.87■□□□□ 0.93
SMARCC2-210ENST00000550519 IMPACTQ9P2X3 320 aa20.87■□□□□ 0.93
SMARCC2-210ENST00000550519 ERRFI1Q9UJM3 462 aaPredicted RBP20.87■□□□□ 0.93
SMARCC2-210ENST00000550519 RIMKLBQ9ULI2 386 aa20.87■□□□□ 0.93
SMARCC2-210ENST00000550519 TCRBV7S2A1N4TA0A589 114 aa20.86■□□□□ 0.93
SMARCC2-210ENST00000550519 MIF4GDA9UHW6 222 aaKnown RBP20.86■□□□□ 0.93
SMARCC2-210ENST00000550519 ATXN8OSP0DMR3 200 aa20.86■□□□□ 0.93
SMARCC2-210ENST00000550519 MAGP20916 626 aa20.86■□□□□ 0.93
SMARCC2-210ENST00000550519 CCR7P32248 378 aa20.86■□□□□ 0.93
SMARCC2-210ENST00000550519 RAB28P51157 221 aa20.86■□□□□ 0.93
SMARCC2-210ENST00000550519 CDH17Q12864 832 aa20.86■□□□□ 0.93
SMARCC2-210ENST00000550519 PEX26Q7Z412 305 aa20.86■□□□□ 0.93
SMARCC2-210ENST00000550519 FAM20CQ8IXL6 584 aa20.86■□□□□ 0.93
SMARCC2-210ENST00000550519 SLC22A15Q8IZD6 547 aa20.86■□□□□ 0.93
SMARCC2-210ENST00000550519 UBL4BQ8N7F7 174 aa20.86■□□□□ 0.93
SMARCC2-210ENST00000550519 LINC01555Q8NAE3 123 aa20.86■□□□□ 0.93
SMARCC2-210ENST00000550519 ACRBPQ8NEB7 543 aa20.86■□□□□ 0.93
SMARCC2-210ENST00000550519 TM9SF4Q92544 642 aa20.86■□□□□ 0.93
SMARCC2-210ENST00000550519 INPP5DQ92835 1189 aa20.86■□□□□ 0.93
SMARCC2-210ENST00000550519 BARD1Q99728 777 aaKnown RBP20.86■□□□□ 0.93
SMARCC2-210ENST00000550519 ATP13A2Q9NQ11 1180 aa20.86■□□□□ 0.93
SMARCC2-210ENST00000550519 IRAK4Q9NWZ3 460 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms