RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 ZNF225Q9UK10 706 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 BLOC1S6Q9UL45 172 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 PCDHGA8Q9Y5G5 932 aa10.86□□□□□ -0.67
LINC00661-204ENST00000549354 TRAV19A0A0A6YYK7 116 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 A0A1W2PP18 115 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 CDH3P22223 829 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 DDX6P26196 483 aaKnown RBP eCLIP10.85□□□□□ -0.67
LINC00661-204ENST00000549354 PLA2G16P53816 162 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 CYP4F8P98187 520 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 TIAL1Q01085 375 aaKnown RBP eCLIP10.85□□□□□ -0.67
LINC00661-204ENST00000549354 RAD51Q06609 339 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 VAC14Q08AM6 782 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 LCN8Q6JVE9 175 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 C8orf82Q6P1X6 216 aaPredicted RBP10.85□□□□□ -0.67
LINC00661-204ENST00000549354 CRTC3Q6UUV7 619 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 PHYKPLQ8IUZ5 450 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 MINDY1Q8N5J2 469 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 MDGA1Q8NFP4 955 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 SPPL3Q8TCT6 385 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 TCF25Q9BQ70 676 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 BDH2Q9BUT1 245 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 NLE1Q9NVX2 485 aaPredicted RBP10.85□□□□□ -0.67
LINC00661-204ENST00000549354 LSM7Q9UK45 103 aaKnown RBP10.85□□□□□ -0.67
LINC00661-204ENST00000549354 RWDD3Q9Y3V2 267 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 F5P12259 2224 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 hCG_2039718K7EN88 272 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 GBAP04062 536 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 CHRM5P08912 532 aaPredicted RBP10.85□□□□□ -0.67
LINC00661-204ENST00000549354 IDO1P14902 403 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 MZF1P28698 734 aaPredicted RBP10.85□□□□□ -0.67
LINC00661-204ENST00000549354 HOXA9P31269 272 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 CSNK1DP48730 415 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 ZNF140P52738 457 aaPredicted RBP10.85□□□□□ -0.67
LINC00661-204ENST00000549354 ARSFP54793 590 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 LCP2Q13094 533 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 CCNYL2Q5T2Q4 361 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 LETMD1Q6P1Q0 360 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 IGFN1Q86VF2 1251 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 ELMOD1Q8N336 334 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 C2orf73Q8N5S3 287 aaPredicted RBP10.85□□□□□ -0.67
LINC00661-204ENST00000549354 CNIH3Q8TBE1 160 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 ZUFSPQ96AP4 578 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 BBS2Q9BXC9 721 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 SLC46A2Q9BY10 475 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 ATG10Q9H0Y0 220 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 CARS2Q9HA77 564 aaKnown RBP10.85□□□□□ -0.67
LINC00661-204ENST00000549354 SCUBE2Q9NQ36 999 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 PCDHB3Q9Y5E6 796 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 GPR45Q9Y5Y3 372 aa10.85□□□□□ -0.67
LINC00661-204ENST00000549354 FZD6O60353 706 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 RPP40O75818 363 aaKnown RBP10.84□□□□□ -0.67
LINC00661-204ENST00000549354 GLUD1P00367 558 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 POU2F2P09086 479 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 HSD17B1P14061 328 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 FMO3P31513 532 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 IDUAP35475 653 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 SLC26A3P40879 764 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 BCAP31P51572 246 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 IL5RAQ01344 420 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 BNIP2Q12982 314 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 TAF1AQ15573 450 aaPredicted RBP10.84□□□□□ -0.67
LINC00661-204ENST00000549354 RGS21Q2M5E4 152 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 MPPE1Q53F39 396 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 RFLNAQ6ZTI6 216 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 SFRP1Q8N474 314 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 FIBINQ8TAL6 211 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 C19orf43Q9BQ61 176 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 CIPCQ9C0C6 399 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 SMG9Q9H0W8 520 aaKnown RBP10.84□□□□□ -0.67
LINC00661-204ENST00000549354 RIBC2Q9H4K1 309 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 MARCH7Q9H992 704 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 ABCD2Q9UBJ2 740 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 SLC30A1Q9Y6M5 507 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 TYW5A2RUC4 315 aaKnown RBP10.84□□□□□ -0.67
LINC00661-204ENST00000549354 M0R129 80 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 FKBP9O95302 570 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 CPSF4O95639 269 aaKnown RBP10.84□□□□□ -0.67
LINC00661-204ENST00000549354 CST1P01037 141 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 ITPKAP23677 461 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 CA5AP35218 305 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 TMED10P49755 219 aaKnown RBP10.84□□□□□ -0.67
LINC00661-204ENST00000549354 BOP1Q14137 746 aaKnown RBP10.84□□□□□ -0.67
LINC00661-204ENST00000549354 ABRAXAS2Q15018 415 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 FKBP9P1Q75LS8 142 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 ZDHHC13Q8IUH4 622 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 RAVER1Q8IY67 606 aaKnown RBP10.84□□□□□ -0.67
LINC00661-204ENST00000549354 STAG3L4Q8TBR4 150 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 WFDC5Q8TCV5 224 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 TAMM41Q96BW9 452 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 TRMOQ9BU70 441 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 CFAP97Q9P2B7 532 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 VPS51Q9UID3 782 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 ALPK2Q86TB3 2170 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 LCHNA4D1U4 455 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 HIDE1A8MVS5 230 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 MOSPD3O75425 235 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 THRBP10828 461 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 PORP16435 677 aaPredicted RBP10.84□□□□□ -0.67
LINC00661-204ENST00000549354 HOXB8P17481 243 aaPredicted RBP10.84□□□□□ -0.67
LINC00661-204ENST00000549354 OGNP20774 298 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms