RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 VPS37BQ9H9H4 285 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 AGPAT4Q9NRZ5 378 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 IMPACTQ9P2X3 320 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 PCDHA13Q9Y5I0 950 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 SCN2AQ99250 2005 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 A0A0J9YY10 115 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 OR51F1A6NGY5 319 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 H3BMH7 237 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 APOC4-APOC2K7ER74 178 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 IPO13O94829 963 aaKnown RBP11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 APOC2P02655 101 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 MSL3P1P0C860 447 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 RBP3P10745 1247 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 SHMT2P34897 504 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 GRIA3P42263 894 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 CDC16Q13042 620 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 ZNF658BQ4V348 819 aaPredicted RBP11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 AADACL2Q6P093 401 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 MRPL14Q6P1L8 145 aaKnown RBP11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 IGFL3Q6UXB1 125 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 Q6ZS92 163 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 TTLL10Q6ZVT0 673 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 BBS12Q6ZW61 710 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 TAX1BP1Q86VP1 789 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 PIANPQ8IYJ0 282 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 CCDC170Q8IYT3 715 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 METTL27Q8N6F8 245 aaPredicted RBP11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 CFAP61Q8NHU2 1237 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 GRHL3Q8TE85 626 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 FERMT1Q9BQL6 677 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 SOX17Q9H6I2 414 aaPredicted RBP11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 SLC6A20Q9NP91 592 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 SLC22A11Q9NSA0 550 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 CDC23Q9UJX2 597 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 FBXL4Q9UKA2 621 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 NOVA2Q9UNW9 492 aaKnown RBP11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 SRPK3Q9UPE1 567 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 PCDHGA10Q9Y5H3 936 aa11.51□□□□□ -0.57
TRAFD1-205ENST00000548277 AGPSO00116 658 aa11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 ZG16O60844 167 aa11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 STK10O94804 968 aaKnown RBP11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 IGHEP01854 428 aa11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 PRF1P14222 555 aa11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 MCM3P25205 808 aa11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 TNFRSF8P28908 595 aa11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 PEBP1P30086 187 aaKnown RBP11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 CYLC1P35663 651 aaPredicted RBP11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 AIMP2Q13155 320 aaKnown RBP11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 RPA4Q13156 261 aa11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 POU6F1Q14863 301 aa11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 DBN1Q16643 649 aa11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 GPR33Q49SQ1 333 aa11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 SYTL3Q4VX76 610 aa11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 SP5Q6BEB4 398 aaPredicted RBP11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 TLDC1Q6P9B6 456 aa11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 LINC00696Q6ZRV3 163 aa11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 CDKL3Q8IVW4 592 aaPredicted RBP11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 DNAJC22Q8N4W6 341 aa11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 CATSPER1Q8NEC5 780 aa11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 FLVCR1-AS1Q8TAF5 88 aa11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 PROKR1Q8TCW9 393 aa11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 CDKN2AIPNLQ96HQ2 116 aa11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 WDR77Q9BQA1 342 aaPredicted RBP11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 EURLQ9NYK6 297 aa11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 PLCL2Q9UPR0 1127 aa11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.5□□□□□ -0.57
TRAFD1-205ENST00000548277 POLEQ07864 2286 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 ITPR2Q14571 2701 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 SCN3AQ9NY46 2000 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 PRRC2CQ9Y520 2896 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 HEATR5BQ9P2D3 2071 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 IGLV3-16A0A075B6K0 115 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 TRBV5-4A0A0C4DH59 114 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 KLHL41O60662 606 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 CD63P08962 238 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 MAGP20916 626 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 ACADLP28330 430 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 SRSF11Q05519 484 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 CACNG1Q06432 222 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 CCDC38Q502W7 563 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 AGAP7PQ5VUJ5 663 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 IRAK1BP1Q5VVH5 260 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 PRAMEF13Q5VWM6 474 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 C11orf63Q6NUN7 778 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 FJX1Q86VR8 437 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 MCATQ8IVS2 390 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 PRSS58Q8IYP2 241 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 TBC1D21Q8IYX1 336 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 DTWD1Q8N5C7 304 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 ST6GALNAC3Q8NDV1 305 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 MARVELD3Q96A59 401 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 THOC3Q96J01 351 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 AGAP4Q96P64 663 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 IL17FQ96PD4 163 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 ALS2CR12Q96Q35 445 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 MESP1Q9BRJ9 268 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 UNKQ9C0B0 810 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 LUC7LQ9NQ29 371 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 NLE1Q9NVX2 485 aaPredicted RBP11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms