RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 RNF135Q8IUD6 432 aa16.74■□□□□ 0.27
LETMD1-210ENST00000547555 NPAS3Q8IXF0 933 aa16.74■□□□□ 0.27
LETMD1-210ENST00000547555 GLB1L3Q8NCI6 653 aaPredicted RBP16.74■□□□□ 0.27
LETMD1-210ENST00000547555 DNAJB14Q8TBM8 379 aa16.74■□□□□ 0.27
LETMD1-210ENST00000547555 FAM110BQ8TC76 370 aa16.74■□□□□ 0.27
LETMD1-210ENST00000547555 IPCEF1Q8WWN9 437 aaPredicted RBP16.74■□□□□ 0.27
LETMD1-210ENST00000547555 TADA1Q96BN2 335 aa16.74■□□□□ 0.27
LETMD1-210ENST00000547555 YIPF6Q96EC8 236 aa16.74■□□□□ 0.27
LETMD1-210ENST00000547555 ASPSCR1Q9BZE9 553 aa16.74■□□□□ 0.27
LETMD1-210ENST00000547555 TUBB1Q9H4B7 451 aa16.74■□□□□ 0.27
LETMD1-210ENST00000547555 RMI1Q9H9A7 625 aa16.74■□□□□ 0.27
LETMD1-210ENST00000547555 IL1RL2Q9HB29 575 aa16.74■□□□□ 0.27
LETMD1-210ENST00000547555 PRDM6Q9NQX0 595 aa16.74■□□□□ 0.27
LETMD1-210ENST00000547555 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.74■□□□□ 0.27
LETMD1-210ENST00000547555 SCN3BQ9NY72 215 aa16.74■□□□□ 0.27
LETMD1-210ENST00000547555 LOC100130705A0A1B0GUX0 176 aa16.73■□□□□ 0.27
LETMD1-210ENST00000547555 ASPDHA6ND91 283 aa16.73■□□□□ 0.27
LETMD1-210ENST00000547555 SNX4O95219 450 aa16.73■□□□□ 0.27
LETMD1-210ENST00000547555 OXSR1O95747 527 aaPredicted RBP16.73■□□□□ 0.27
LETMD1-210ENST00000547555 MTHFD1P11586 935 aaKnown RBP16.73■□□□□ 0.27
LETMD1-210ENST00000547555 ST13P50502 369 aaKnown RBP16.73■□□□□ 0.27
LETMD1-210ENST00000547555 PLK1P53350 603 aa16.73■□□□□ 0.27
LETMD1-210ENST00000547555 MLLT10P55197 1068 aa16.73■□□□□ 0.27
LETMD1-210ENST00000547555 PUS10Q3MIT2 529 aaKnown RBP16.73■□□□□ 0.27
LETMD1-210ENST00000547555 TBPL2Q6SJ96 375 aa16.73■□□□□ 0.27
LETMD1-210ENST00000547555 CPNE9Q8IYJ1 553 aa16.73■□□□□ 0.27
LETMD1-210ENST00000547555 NKAPQ8N5F7 415 aaKnown RBP16.73■□□□□ 0.27
LETMD1-210ENST00000547555 OR56A4Q8NGH8 313 aa16.73■□□□□ 0.27
LETMD1-210ENST00000547555 DYNC2LI1Q8TCX1 351 aa16.73■□□□□ 0.27
LETMD1-210ENST00000547555 PTERQ96BW5 349 aa16.73■□□□□ 0.27
LETMD1-210ENST00000547555 C1orf74Q96LT6 269 aa16.73■□□□□ 0.27
LETMD1-210ENST00000547555 ABCC13Q9NSE7 274 aa16.73■□□□□ 0.27
LETMD1-210ENST00000547555 TESMINQ9Y4I5 508 aa16.73■□□□□ 0.27
LETMD1-210ENST00000547555 C5orf42Q9H799 3197 aa16.73■□□□□ 0.27
LETMD1-210ENST00000547555 C2orf78A6NCI8 922 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.72■□□□□ 0.27
LETMD1-210ENST00000547555 H0Y626 953 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 TLR5O60602 858 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 TRIM16O95361 564 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 HLA-DQB2P05538 268 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 HTR1AP08908 422 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 SLC2A3P11169 496 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 NEK2P51955 445 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 POLD3Q15054 466 aaPredicted RBP16.72■□□□□ 0.27
LETMD1-210ENST00000547555 SMAD2Q15796 467 aaKnown RBP16.72■□□□□ 0.27
LETMD1-210ENST00000547555 TYSND1Q2T9J0 566 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 ARHGAP15Q53QZ3 475 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 HECTD3Q5T447 861 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 MSANTD2Q6P1R3 559 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 GET4Q7L5D6 327 aaPredicted RBP16.72■□□□□ 0.27
LETMD1-210ENST00000547555 ADCK1Q86TW2 530 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 P2RY8Q86VZ1 359 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 FBXO39Q8N4B4 442 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 ING5Q8WYH8 240 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 FGF13Q92913 245 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 ZNF300Q96RE9 604 aaPredicted RBP16.72■□□□□ 0.27
LETMD1-210ENST00000547555 KLHL25Q9H0H3 589 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 DFFAO00273 331 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 RECQL5O94762 991 aaPredicted RBP16.72■□□□□ 0.27
LETMD1-210ENST00000547555 F7P08709 466 aaPredicted RBP16.72■□□□□ 0.27
LETMD1-210ENST00000547555 HLA-DPA1P20036 260 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 PSMA3P25788 255 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 WEE1P30291 646 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 ETFBP38117 255 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 YAP1P46937 504 aaKnown RBP16.72■□□□□ 0.27
LETMD1-210ENST00000547555 GP2P55259 537 aaKnown RBP16.72■□□□□ 0.27
LETMD1-210ENST00000547555 CDKN2DP55273 166 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 ZNF45Q02386 682 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 TFF2Q03403 129 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 CD47Q08722 323 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 MAD2L1Q13257 205 aaPredicted RBP16.72■□□□□ 0.27
LETMD1-210ENST00000547555 RABL3Q5HYI8 236 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 PAGE3Q5JUK9 113 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 TXNDC8Q6A555 127 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 TMEM207Q6UWW9 146 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 DLEU7Q6UYE1 221 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 MMAAQ8IVH4 418 aaKnown RBP16.72■□□□□ 0.27
LETMD1-210ENST00000547555 UMODL1-AS1Q8N2C9 162 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 RTL3Q8N8U3 475 aaKnown RBP16.72■□□□□ 0.27
LETMD1-210ENST00000547555 NETO2Q8NC67 525 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 GALNT6Q8NCL4 622 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 FAR1Q8WVX9 515 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 HPS1Q92902 700 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 ZNF382Q96SR6 550 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 CDK5RAP1Q96SZ6 601 aaKnown RBP16.72■□□□□ 0.27
LETMD1-210ENST00000547555 SEPHS2Q99611 448 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 SLC46A2Q9BY10 475 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 CCSER2Q9H7U1 834 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 GDE1Q9NZC3 331 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 GMPR2Q9P2T1 348 aaKnown RBP16.72■□□□□ 0.27
LETMD1-210ENST00000547555 COMMD10Q9Y6G5 202 aa16.72■□□□□ 0.27
LETMD1-210ENST00000547555 KIF26AQ9ULI4 1882 aaPredicted RBP16.71■□□□□ 0.27
LETMD1-210ENST00000547555 LSM1O15116 133 aaKnown RBP16.71■□□□□ 0.27
LETMD1-210ENST00000547555 CD3EAPO15446 510 aaKnown RBP16.71■□□□□ 0.27
LETMD1-210ENST00000547555 COCHO43405 550 aa16.71■□□□□ 0.27
LETMD1-210ENST00000547555 PMPCBO75439 489 aa16.71■□□□□ 0.27
LETMD1-210ENST00000547555 MYO1DO94832 1006 aa16.71■□□□□ 0.27
LETMD1-210ENST00000547555 CES1P23141 567 aa16.71■□□□□ 0.27
LETMD1-210ENST00000547555 KCNC1P48547 511 aa16.71■□□□□ 0.27
LETMD1-210ENST00000547555 OTUD3Q5T2D3 398 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms