RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 WASHC5Q12768 1159 aa12.25□□□□□ -0.45
SCAF11-208ENST00000546534 MFAP5Q13361 173 aa12.25□□□□□ -0.45
SCAF11-208ENST00000546534 NKG7Q16617 165 aa12.25□□□□□ -0.45
SCAF11-208ENST00000546534 STX1AQ16623 288 aa12.25□□□□□ -0.45
SCAF11-208ENST00000546534 TUBB8Q3ZCM7 444 aa12.25□□□□□ -0.45
SCAF11-208ENST00000546534 ZNF658BQ4V348 819 aaPredicted RBP12.25□□□□□ -0.45
SCAF11-208ENST00000546534 GFRALQ6UXV0 394 aa12.25□□□□□ -0.45
SCAF11-208ENST00000546534 SPNS3Q6ZMD2 512 aa12.25□□□□□ -0.45
SCAF11-208ENST00000546534 UNC5AQ6ZN44 842 aa12.25□□□□□ -0.45
SCAF11-208ENST00000546534 SHISA6Q6ZSJ9 500 aa12.25□□□□□ -0.45
SCAF11-208ENST00000546534 OVCH1Q7RTY7 1134 aa12.25□□□□□ -0.45
SCAF11-208ENST00000546534 DNAJC22Q8N4W6 341 aa12.25□□□□□ -0.45
SCAF11-208ENST00000546534 IPMKQ8NFU5 416 aa12.25□□□□□ -0.45
SCAF11-208ENST00000546534 FLVCR1-AS1Q8TAF5 88 aa12.25□□□□□ -0.45
SCAF11-208ENST00000546534 TFGQ92734 400 aaPredicted RBP12.25□□□□□ -0.45
SCAF11-208ENST00000546534 FKBP10Q96AY3 582 aa12.25□□□□□ -0.45
SCAF11-208ENST00000546534 DCUN1D1Q96GG9 259 aa12.25□□□□□ -0.45
SCAF11-208ENST00000546534 POM121Q96HA1 1249 aa12.25□□□□□ -0.45
SCAF11-208ENST00000546534 LMF1Q96S06 567 aa12.25□□□□□ -0.45
SCAF11-208ENST00000546534 MAK16Q9BXY0 300 aaKnown RBP12.25□□□□□ -0.45
SCAF11-208ENST00000546534 SPHK1Q9NYA1 384 aa12.25□□□□□ -0.45
SCAF11-208ENST00000546534 FKBPLQ9UIM3 349 aa12.25□□□□□ -0.45
SCAF11-208ENST00000546534 BZW2Q9Y6E2 419 aaKnown RBP12.25□□□□□ -0.45
SCAF11-208ENST00000546534 A0A0J9YY10 115 aa12.24□□□□□ -0.45
SCAF11-208ENST00000546534 AGAP14A8MT82 685 aa12.24□□□□□ -0.45
SCAF11-208ENST00000546534 RALBP11234 206 aa12.24□□□□□ -0.45
SCAF11-208ENST00000546534 DYNLT1P63172 113 aa12.24□□□□□ -0.45
SCAF11-208ENST00000546534 XIAPP98170 497 aa12.24□□□□□ -0.45
SCAF11-208ENST00000546534 NUP210LQ5VU65 1888 aa12.24□□□□□ -0.45
SCAF11-208ENST00000546534 TMEM207Q6UWW9 146 aa12.24□□□□□ -0.45
SCAF11-208ENST00000546534 RPTNQ6XPR3 784 aa12.24□□□□□ -0.45
SCAF11-208ENST00000546534 TTLL10Q6ZVT0 673 aa12.24□□□□□ -0.45
SCAF11-208ENST00000546534 COX15Q7KZN9 410 aa12.24□□□□□ -0.45
SCAF11-208ENST00000546534 RFX6Q8HWS3 928 aa12.24□□□□□ -0.45
SCAF11-208ENST00000546534 OR11G2Q8NGC1 345 aa12.24□□□□□ -0.45
SCAF11-208ENST00000546534 OR4K2Q8NGD2 314 aa12.24□□□□□ -0.45
SCAF11-208ENST00000546534 CPLX3Q8WVH0 158 aa12.24□□□□□ -0.45
SCAF11-208ENST00000546534 NAP1L5Q96NT1 182 aaPredicted RBP12.24□□□□□ -0.45
SCAF11-208ENST00000546534 MESP1Q9BRJ9 268 aa12.24□□□□□ -0.45
SCAF11-208ENST00000546534 WDR54Q9H977 334 aa12.24□□□□□ -0.45
SCAF11-208ENST00000546534 MRM3Q9HC36 420 aaKnown RBP12.24□□□□□ -0.45
SCAF11-208ENST00000546534 SAE1Q9UBE0 346 aaPredicted RBP12.24□□□□□ -0.45
SCAF11-208ENST00000546534 CRLS1Q9UJA2 301 aa12.24□□□□□ -0.45
SCAF11-208ENST00000546534 SH3BGRL2Q9UJC5 107 aa12.24□□□□□ -0.45
SCAF11-208ENST00000546534 PLCL2Q9UPR0 1127 aa12.24□□□□□ -0.45
SCAF11-208ENST00000546534 ANKRD12Q6UB98 2062 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 A0A1B0GX78 115 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 PRICKLE3O43900 615 aaPredicted RBP12.23□□□□□ -0.45
SCAF11-208ENST00000546534 DIAPH2O60879 1101 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 UNC5CO95185 931 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 ONECUT2O95948 504 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 ALBP02768 609 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 SERPING1P05155 500 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 CHRM5P08912 532 aaPredicted RBP12.23□□□□□ -0.45
SCAF11-208ENST00000546534 TPBGLP0DKB5 382 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 ATP1B2P14415 290 aaPredicted RBP12.23□□□□□ -0.45
SCAF11-208ENST00000546534 ZFXP17010 805 aaPredicted RBP12.23□□□□□ -0.45
SCAF11-208ENST00000546534 SSTR2P30874 369 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 CA7P43166 264 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 SRSF11Q05519 484 aaKnown RBP12.23□□□□□ -0.45
SCAF11-208ENST00000546534 RBBP7Q16576 425 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 SLC5A12Q1EHB4 618 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 FILIP1LQ4L180 1135 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 MTFR2Q6P444 385 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 VSIG1Q86XK7 387 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 FAM20CQ8IXL6 584 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 OR5AR1Q8NGP9 310 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.23□□□□□ -0.45
SCAF11-208ENST00000546534 DLG3Q92796 817 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 FCRL5Q96RD9 977 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 SLC26A1Q9H2B4 701 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 FAM96AQ9H5X1 160 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 SOX17Q9H6I2 414 aaPredicted RBP12.23□□□□□ -0.45
SCAF11-208ENST00000546534 LMBRD1Q9NUN5 540 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 EURLQ9NYK6 297 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 PLA2G3Q9NZ20 509 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 CHMP5Q9NZZ3 219 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 UVRAGQ9P2Y5 699 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 CTSFQ9UBX1 484 aa12.23□□□□□ -0.45
SCAF11-208ENST00000546534 A0A1B0GTH6 734 aa12.22□□□□□ -0.45
SCAF11-208ENST00000546534 C2orf81A6NN90 581 aa12.22□□□□□ -0.45
SCAF11-208ENST00000546534 RNF223E7ERA6 249 aa12.22□□□□□ -0.45
SCAF11-208ENST00000546534 C19orf84I3L1E1 186 aa12.22□□□□□ -0.45
SCAF11-208ENST00000546534 KCNN4O15554 427 aa12.22□□□□□ -0.45
SCAF11-208ENST00000546534 AGTP01019 485 aa12.22□□□□□ -0.45
SCAF11-208ENST00000546534 KRT1P04264 644 aa12.22□□□□□ -0.45
SCAF11-208ENST00000546534 PIM1P11309 404 aaPredicted RBP12.22□□□□□ -0.45
SCAF11-208ENST00000546534 MST1P26927 711 aa12.22□□□□□ -0.45
SCAF11-208ENST00000546534 SHMT2P34897 504 aa12.22□□□□□ -0.45
SCAF11-208ENST00000546534 PBX1P40424 430 aa12.22□□□□□ -0.45
SCAF11-208ENST00000546534 TNFSF10P50591 281 aa12.22□□□□□ -0.45
SCAF11-208ENST00000546534 ARSFP54793 590 aa12.22□□□□□ -0.45
SCAF11-208ENST00000546534 ARG2P78540 354 aa12.22□□□□□ -0.45
SCAF11-208ENST00000546534 RPA4Q13156 261 aa12.22□□□□□ -0.45
SCAF11-208ENST00000546534 MPP3Q13368 585 aa12.22□□□□□ -0.45
SCAF11-208ENST00000546534 MESDQ14696 234 aa12.22□□□□□ -0.45
SCAF11-208ENST00000546534 TAF1AQ15573 450 aaPredicted RBP12.22□□□□□ -0.45
SCAF11-208ENST00000546534 FIGNQ5HY92 759 aa12.22□□□□□ -0.45
SCAF11-208ENST00000546534 ZNF449Q6P9G9 518 aa12.22□□□□□ -0.45
SCAF11-208ENST00000546534 XKRXQ6PP77 449 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms